bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-35_CDS_annotation_glimmer3.pl_2_1 Length=91 Score E Sequences producing significant alignments: (Bits) Value tve:TRV_07727 dienelactone hydrolase family protein 33.1 5.3 abe:ARB_07159 dienelactone hydrolase family protein 33.1 5.3 > tve:TRV_07727 dienelactone hydrolase family protein Length=247 Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 20/35 (57%), Gaps = 3/35 (9%) Query 1 VSHGF---GRLSKEDIKIMRENMLRSSTSWFCVYI 32 VSHGF G LSK DI +E L + +WF Y+ Sbjct 213 VSHGFAVRGDLSKPDIMFAKEQALAQALAWFGQYL 247 > abe:ARB_07159 dienelactone hydrolase family protein Length=247 Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 20/35 (57%), Gaps = 3/35 (9%) Query 1 VSHGF---GRLSKEDIKIMRENMLRSSTSWFCVYI 32 VSHGF G LSK DI +E L + +WF Y+ Sbjct 213 VSHGFAVRGDLSKPDIMFAKEQALAQALAWFGQYL 247 Lambda K H a alpha 0.328 0.139 0.466 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127599116940