bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-31_CDS_annotation_glimmer3.pl_2_2

Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  ppp:PHYPADRAFT_160011  hypothetical protein                         32.7    4.2
  nko:Niako_7294  hypothetical protein                                31.6    9.2
  tad:TRIADDRAFT_64077  expressed hypothetical protein                31.6    9.3
  bmet:BMMGA3_12260  hypothetical protein                             29.6    10.0


> ppp:PHYPADRAFT_160011  hypothetical protein
Length=535

 Score = 32.7 bits (73),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 21/66 (32%), Positives = 38/66 (58%), Gaps = 11/66 (17%)

Query  5    ANQWIE--IVKLISTFVIGIITTLFVQSCTL---------SLSVSKNNSNSTQQTEQSSV  53
            A  WI   +  L+S F IG+I T+FV++  L         S++ S N++ ST +   +++
Sbjct  143  AYYWIPRILAFLLSLFAIGVIITMFVRNSQLHDRAFKVRDSIAASANDATSTVRNVSNTL  202

Query  54   SSIDST  59
            S++D+T
Sbjct  203  SNVDTT  208


> nko:Niako_7294  hypothetical protein
Length=317

 Score = 31.6 bits (70),  Expect = 9.2, Method: Composition-based stats.
 Identities = 17/55 (31%), Positives = 32/55 (58%), Gaps = 0/55 (0%)

Query  10   EIVKLISTFVIGIITTLFVQSCTLSLSVSKNNSNSTQQTEQSSVSSIDSTSIDLK  64
            +++ LI  FV G+   + V +  L+L +S N SN+T+Q+    + S+ +  I+ K
Sbjct  101  KMLGLIPGFVNGVTHAVIVAALLLALPISNNISNTTRQSRFVVMLSVPAELIETK  155


> tad:TRIADDRAFT_64077  expressed hypothetical protein
Length=328

 Score = 31.6 bits (70),  Expect = 9.3, Method: Compositional matrix adjust.
 Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 4/60 (7%)

Query  6    NQWIEIVKLISTFVIGIITTLFVQSCTLSLSVSKNNSNSTQQTEQSSVSSIDSTSIDLKR  65
            ++WI++   ++ F++GI    F      +L++ +NN     +TE  +++ ++S  +DL+R
Sbjct  258  HRWIDV---LTGFILGISIAFFTAMKICNLNLFENNGEK-NKTEVDAITFVESNPVDLER  313


> bmet:BMMGA3_12260  hypothetical protein
Length=63

 Score = 29.6 bits (65),  Expect = 10.0, Method: Compositional matrix adjust.
 Identities = 15/36 (42%), Positives = 21/36 (58%), Gaps = 0/36 (0%)

Query  23  ITTLFVQSCTLSLSVSKNNSNSTQQTEQSSVSSIDS  58
           I   +  +C + LSVSKN  N+ Q  E  S+SS+D 
Sbjct  17  INQYYCWNCFIELSVSKNMINTHQVEEDGSLSSLDD  52



Lambda      K        H        a         alpha
   0.311    0.121    0.309    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128662101624