bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-25_CDS_annotation_glimmer3.pl_2_6 Length=76 Score E Sequences producing significant alignments: (Bits) Value cdu:CD36_32190 major facilitator superfamily (MFS) transporter... 32.7 6.1 cal:CaO19.8319 SEO12; one of two genes similar to S. cerevisia... 32.0 9.5 > cdu:CD36_32190 major facilitator superfamily (MFS) transporter, putative Length=619 Score = 32.7 bits (73), Expect = 6.1, Method: Composition-based stats. Identities = 22/60 (37%), Positives = 27/60 (45%), Gaps = 4/60 (7%) Query 14 GQFSEPRIFMNEGLAVRWFKNLCEKSEIASDLSLYYLGEY--DLESGVISSAPEFVMNGV 71 G F P L WFK EIA YYLG+Y L SG++S A ++GV Sbjct 248 GAFEAPSYLAYHALFASWFKG--STGEIARRAGFYYLGQYLGVLTSGLLSGAIVRHLDGV 305 > cal:CaO19.8319 SEO12; one of two genes similar to S. cerevisiae SEO1 (YAL067C) putative permase, suppressor of sulfoxide ethionine resistance Length=609 Score = 32.0 bits (71), Expect = 9.5, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 4/52 (8%) Query 14 GQFSEPRIFMNEGLAVRWFKNLCEKSEIASDLSLYYLGEY--DLESGVISSA 63 G F P L WFK EIA YYLG+Y L SG++S A Sbjct 239 GAFEAPSYLAYHALFASWFKG--STGEIARRAGFYYLGQYLGVLTSGLLSGA 288 Lambda K H a alpha 0.318 0.135 0.386 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 129127441832