bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-24_CDS_annotation_glimmer3.pl_2_3 Length=591 Score E Sequences producing significant alignments: (Bits) Value pmum:103324615 myb-related protein Myb4-like 38.1 3.7 nla:NLA_17730 phosphatase 37.0 6.8 strp:F750_3527 hypothetical protein 37.4 9.2 sfa:Sfla_3219 hypothetical protein 37.0 9.9 > pmum:103324615 myb-related protein Myb4-like Length=248 Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/77 (42%), Positives = 37/77 (48%), Gaps = 11/77 (14%) Query 423 DNIAMQGLKASTVFGEVQSLGATSPTY--SNSVFAVPGFKLQDTNYVGYEPAWSELMTAV 480 D IA Q + AS FGE+QSL A S S +VF PGF L + P S L + Sbjct 168 DQIAEQNICASETFGELQSLWAESHIVRDSEAVFTDPGFTLSNP------PTQSWLQEPI 221 Query 481 SKPHGRLCNDL--DYWV 495 P G ND DYWV Sbjct 222 F-PSGSSYNDASNDYWV 237 > nla:NLA_17730 phosphatase Length=219 Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 24/43 (56%), Gaps = 0/43 (0%) Query 396 VPRTYYPSYINPTSRQISLGQQYAPALDNIAMQGLKASTVFGE 438 + RTY Y+NP +R +SL Q P LD + QG + + G+ Sbjct 70 IARTYSAHYLNPNNRNMSLFPQALPCLDTLKAQGFRLAVATGK 112 > strp:F750_3527 hypothetical protein Length=322 Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 41/96 (43%), Gaps = 13/96 (14%) Query 81 DRQLNFQGVTDTPNTVYKPSIAPPIPFDISKPSGDAISFPVSALQTSVPSGSLGAIVGPG 140 +++L + GVTD P + +P P D KP DA + P+GSL A P Sbjct 21 EKKLAWPGVTDHPKSDSRPDHPEP---DHPKPDQDA---------ETAPAGSLEAEAAPS 68 Query 141 SLADYMGEAPG-SIVTGVIDLTPYVGYIDIYYNYYL 175 S D G +P S+ G + P G + Y + Sbjct 69 SATDASGPSPASSVAPGPAERRPGAGLAALSLPYQI 104 > sfa:Sfla_3219 hypothetical protein Length=321 Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 41/96 (43%), Gaps = 13/96 (14%) Query 81 DRQLNFQGVTDTPNTVYKPSIAPPIPFDISKPSGDAISFPVSALQTSVPSGSLGAIVGPG 140 +++L + GVTD P + +P P D KP DA + P+GSL A P Sbjct 20 EKKLAWPGVTDHPKSDSRPDHPEP---DHPKPDQDA---------ETAPAGSLEAEAAPS 67 Query 141 SLADYMGEAPG-SIVTGVIDLTPYVGYIDIYYNYYL 175 S D G +P S+ G + P G + Y + Sbjct 68 SATDASGPSPASSVAPGPAERRPGAGLAALSLPYQI 103 Lambda K H a alpha 0.319 0.134 0.398 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1354074645985