bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-24_CDS_annotation_glimmer3.pl_2_2
Length=307
Score E
Sequences producing significant alignments: (Bits) Value
bfu:BC1G_12956 hypothetical protein 39.7 0.44
pfa:PF10_0207 conserved Plasmodium membrane protein 39.3 0.81
pfh:PFHG_01510 conserved hypothetical protein 38.1 1.6
pfd:PFDG_04343 conserved hypothetical protein 38.1 1.9
saq:Sare_4457 NADH dehydrogenase subunit G 38.1 2.2
afd:Alfi_1492 V8-like Glu-specific endopeptidase 37.7 3.3
stp:Strop_4059 NADH dehydrogenase subunit G (EC:1.6.5.3) 37.4 3.8
scb:SCAB_38031 nuoG; NADH dehydrogenase subunit NuoG 36.6 7.1
mil:ML5_0376 NADH-quinone oxidoreductase, chain g 36.6 7.5
mau:Micau_0401 NADH-quinone oxidoreductase subunit G 36.6 7.5
sma:SAV_4843 nuoG1; NADH dehydrogenase subunit G (EC:1.6.5.3) 36.6 8.0
sci:B446_21520 NADH dehydrogenase subunit G (EC:1.6.99.5) 36.6 8.1
slv:SLIV_15425 nuoG; NADH-quinone oxidoreductase subunit G (EC... 36.6 8.2
sco:SCO4568 nuoG, SCD16A.15c; NADH dehydrogenase subunit G (EC... 36.6 8.2
sve:SVEN_4271 NADH-ubiquinone oxidoreductase chain G (EC:1.6.5.3) 36.6 8.7
sho:SHJGH_5471 NADH dehydrogenase subunit G 36.2 8.8
shy:SHJG_5710 NADH dehydrogenase subunit G 36.2 8.8
sdv:BN159_3810 nuoG; NADH-quinone oxidoreductase subunit G (EC... 36.2 8.9
sgu:SGLAU_19690 nuoG; NADH-quinone oxidoreductase subunit G (E... 36.2 9.3
sna:Snas_1280 NADH-quinone oxidoreductase subunit G 36.2 9.8
> bfu:BC1G_12956 hypothetical protein
Length=234
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 28/53 (53%), Gaps = 3/53 (6%)
Query 125 PYLFVLEVADGKRAAQRRLHSEHRLHLHAIMFGCPLPWWRVRHYWMSFGLAWV 177
P++F L+ DGK A RR HA+ FGC L ++V+ W G+ WV
Sbjct 185 PWIF-LDQGDGK--ASRRGRKSTHARTHAVAFGCILVQFKVKKDWCDLGIIWV 234
> pfa:PF10_0207 conserved Plasmodium membrane protein
Length=454
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query 53 WFVRAHNIYKRLGYNLSDSYFCTFTL---KPEFYEAFCKEPYAFIRRFIDRMRKDPFLRY 109
+F ++ NI K + YN + F FT+ K ++ F K+ YAFI F ++ D ++
Sbjct 181 FFNKSSNISKLISYNSVNFLFLLFTILYFKSDYIYTFFKKKYAFIGEF-KNIKTDKLVKI 239
Query 110 RNPDTGRFCYRKISFPYLFVLEVADGKRAAQRRLHSEHRLHLHAIMFG--CPLPWWRVRH 167
T F + K F L +L + + ++L+ + L +H + F P++ V+
Sbjct 240 HTLSTLLFFFYK--FFVLRLLFILNSYNFFSQKLYLINNL-IHILFFSYISIFPYFLVQA 296
Query 168 YWMSFGL 174
W SF L
Sbjct 297 NWGSFHL 303
> pfh:PFHG_01510 conserved hypothetical protein
Length=328
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query 53 WFVRAHNIYKRLGYNLSDSYFCTFTL---KPEFYEAFCKEPYAFIRRFIDRMRKDPFLRY 109
+F ++ NI K + YN + F FT+ K ++ F K+ YAFI F ++ D ++
Sbjct 198 FFNKSSNISKLISYNSVNFLFLLFTILYFKSDYIYTFFKKKYAFIGEF-KNIKTDKLVKI 256
Query 110 RNPDTGRFCYRKISFPYLFVLEVADGKRAAQRRLHSEHRLHLHAIMFG--CPLPWWRVRH 167
T F + K F L +L + + ++L+ + L +H + F P++ V+
Sbjct 257 HTLSTLLFFFYK--FFVLRLLFILNSYNFFSQKLYLINNL-IHILFFSYISIFPYFLVQA 313
Query 168 YWMSFGL 174
W SF L
Sbjct 314 NWGSFHL 320
> pfd:PFDG_04343 conserved hypothetical protein
Length=311
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query 53 WFVRAHNIYKRLGYNLSDSYFCTFTL---KPEFYEAFCKEPYAFIRRFIDRMRKDPFLRY 109
+F ++ NI K + YN + F FT+ K ++ F K+ YAFI F ++ D ++
Sbjct 181 FFNKSSNISKLISYNSVNFLFLLFTILYFKSDYIYTFFKKKYAFIGEF-KNIKTDKLVKI 239
Query 110 RNPDTGRFCYRKISFPYLFVLEVADGKRAAQRRLHSEHRLHLHAIMFG--CPLPWWRVRH 167
T F + K F L +L + + ++L+ + L +H + F P++ V+
Sbjct 240 HTLSTLLFFFYK--FFVLRLLFILNSYNFFSQKLYLINNL-IHILFFSYISIFPYFLVQA 296
Query 168 YWMSFGL 174
W SF L
Sbjct 297 NWGSFHL 303
> saq:Sare_4457 NADH dehydrogenase subunit G
Length=839
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 6/44 (14%)
Query 6 LRITNPH---YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
+ +T P I++A+QLGVEIP+F D+ L P G C QC+
Sbjct 18 IEVTAPKGALLIRVAEQLGVEIPRF---CDHPLLAPVGACRQCL 58
> afd:Alfi_1492 V8-like Glu-specific endopeptidase
Length=704
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/129 (26%), Positives = 53/129 (41%), Gaps = 12/129 (9%)
Query 129 VLEVADGKRAAQRRLHSEHRLHLHAIMFGCP-LPWWRVRHYWMSFGLAWVNPLRHFGAVR 187
+LE+AD +R RR HRL++ +M P W ++ + V P +R
Sbjct 519 LLELADAQRENNRRFKDGHRLYIAGLMRMQPDKAWASDANFTIRLTYGRVLPYDPADGIR 578
Query 188 YAMKYITKKSAVHWNDIPKE-----ILDLHGRLYVSHGFGRLSESEKDALRAYM----MT 238
Y Y T V + PK + D LY + FGR + +E + A++ +T
Sbjct 579 Y--NYYTTLKGVMEKEDPKNPTEFTVPDKLKELYAAKDFGRYANAEGELPVAFLADCDIT 636
Query 239 GCKQWFSVL 247
G V+
Sbjct 637 GGNSGSPVM 645
> stp:Strop_4059 NADH dehydrogenase subunit G (EC:1.6.5.3)
Length=839
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 27/44 (61%), Gaps = 6/44 (14%)
Query 6 LRITNPH---YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
+ +T P I++A+Q+GVEIP+F D+ L P G C QC+
Sbjct 18 IEVTAPKGALLIRVAEQMGVEIPRF---CDHPLLAPVGACRQCL 58
> scb:SCAB_38031 nuoG; NADH dehydrogenase subunit NuoG
Length=834
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/34 (53%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLGVEIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGVEIPRF---CDHPLLDPVGACRQCI 69
> mil:ML5_0376 NADH-quinone oxidoreductase, chain g
Length=813
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 26/44 (59%), Gaps = 6/44 (14%)
Query 6 LRITNPH---YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
+ +T P I++A+QLG EIP+F D+ L P G C QC+
Sbjct 18 VEVTAPKGALLIRVAEQLGTEIPRF---CDHPLLAPAGACRQCL 58
> mau:Micau_0401 NADH-quinone oxidoreductase subunit G
Length=813
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/44 (41%), Positives = 26/44 (59%), Gaps = 6/44 (14%)
Query 6 LRITNPH---YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
+ +T P I++A+QLG EIP+F D+ L P G C QC+
Sbjct 18 VEVTAPKGALLIRVAEQLGTEIPRF---CDHPLLAPAGACRQCL 58
> sma:SAV_4843 nuoG1; NADH dehydrogenase subunit G (EC:1.6.5.3)
Length=834
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sci:B446_21520 NADH dehydrogenase subunit G (EC:1.6.99.5)
Length=834
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> slv:SLIV_15425 nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
Length=843
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sco:SCO4568 nuoG, SCD16A.15c; NADH dehydrogenase subunit G (EC:1.6.5.3)
Length=843
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sve:SVEN_4271 NADH-ubiquinone oxidoreductase chain G (EC:1.6.5.3)
Length=827
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sho:SHJGH_5471 NADH dehydrogenase subunit G
Length=842
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> shy:SHJG_5710 NADH dehydrogenase subunit G
Length=842
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sdv:BN159_3810 nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
Length=835
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 40 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 70
> sgu:SGLAU_19690 nuoG; NADH-quinone oxidoreductase subunit G
(EC:1.6.99.5)
Length=834
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (65%), Gaps = 3/34 (9%)
Query 13 YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
I+ A+QLG+EIP+F D+ L P G C QCI
Sbjct 39 VIRAAEQLGIEIPRF---CDHPLLDPAGACRQCI 69
> sna:Snas_1280 NADH-quinone oxidoreductase subunit G
Length=797
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 6/44 (14%)
Query 6 LRITNPH---YIKLADQLGVEIPQFSNQSDYKLQVPCGKCVQCI 46
L +T P I+ A+QLG+EIP+F D+ L P G C QC+
Sbjct 12 LEVTVPKGTLVIRAAEQLGIEIPRF---CDHPLLEPAGACRQCL 52
Lambda K H a alpha
0.329 0.142 0.482 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 527948001504