bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: all_orgs 14,240,465 sequences; 5,121,972,263 total letters Query= Contig-24_CDS_annotation_glimmer3.pl_2_1 Length=237 Score E Sequences producing significant alignments: (Bits) Value pop:POPTR_0002s06630g POPTRDRAFT_754432; hypothetical protein 36.6 1.4 cge:100765571 liver carboxylesterase-like 35.8 8.3 > pop:POPTR_0002s06630g POPTRDRAFT_754432; hypothetical protein Length=129 Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 6/83 (7%) Query 30 RRALKLFIKLFIKSLFMEKTPFYRNKAFWTLVTSIIAAFAAYFTVSCSYTQKVFRHGVHH 89 RRA LF L+I LF+E+ R W +++A +F + S T+ + + H Sbjct 48 RRAQDLFCALWIPDLFIERV---RGDGSWKGQKKVVSARKLWFEILNSQTETGTPYMLFH 104 Query 90 DTVKVE---SVIKSRNLSCLTKN 109 DTV + V K+R + L N Sbjct 105 DTVVTDLQLQVGKNRAMCWLRPN 127 > cge:100765571 liver carboxylesterase-like Length=558 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 19/55 (35%), Positives = 26/55 (47%), Gaps = 0/55 (0%) Query 100 SRNLSCLTKNLGTPSHSLSSSNLELISWKHSSSLAPTMPSTVTTSLFGLPWQIVF 154 S + CL N+ TP+H+ SNL ++ W H LA M S S+ IV Sbjct 117 SMSEDCLYLNIYTPAHAHEGSNLPVMVWIHGGGLAIGMASMNDGSILAATEDIVM 171 Lambda K H a alpha 0.322 0.132 0.401 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 326349967776