bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: all_orgs
           14,240,465 sequences; 5,121,972,263 total letters





Query= Contig-21_CDS_annotation_glimmer3.pl_2_2

Length=681
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  asn:102382508  endonuclease domain-containing 1 protein-like        41.6    0.65
  alv:Alvin_2866  hypothetical protein                                36.6    3.2
  ooe:OEOE_1831  Beta-galactosidase                                   38.1    7.3


> asn:102382508  endonuclease domain-containing 1 protein-like
Length=540

 Score = 41.6 bits (96),  Expect = 0.65, Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 38/251 (15%)

Query  108  SKVLLPQFRVSTAVASIYEN-DTNRGQVNPSSLLSYLGIKGFGYSKTNSHIRTFPA--IF  164
            S + L Q + + A++  YEN + +RGQ+NP+S          G + T +   T P    F
Sbjct  112  SGLTLEQLQSAQAISRDYENTNYDRGQLNPNSFQY-----DSGSTATFTLTNTVPMNHCF  166

Query  165  NLAYWDIFKNYYANKQEEN-------AYVITGINHIWKKISAGDGVAWNREWTEN----S  213
            N  +W   +    +K ++N       AY++TG     +KI   D   W+R+ T N    +
Sbjct  167  NQMHWRKLEESLRDKLKQNCLNEGGTAYLVTGAVAGTEKIPKKDDQEWDRQRTYNRVAVA  226

Query  214  SEAYPLNPSSQAPSFIKLEFEEKISPEEVNEIQFLTNDPEKPSQKINKLTKLGNAFIFER  273
            S  +       A + +K  F      +E ++++F +   ++ ++K+ ++    N  +   
Sbjct  227  SHIWTAVCCDNANNNLKFSFAILAENKEESKLRFFS--VKQLNKKLQEMYSTQNIRVLA-  283

Query  274  TDPEAMGLKKPDNPKRATNIYVYQVKKPIYLAYNMNIAGNNYLTMPDNKKIKLTPFPLKN  333
             D  A   K        T   +  +K+ +Y A+   I    +  +P +K+        KN
Sbjct  284  DDCNAQSQK--------TQEVLSAIKQDLYSAFWDLILNLYHQVLPSDKR--------KN  327

Query  334  IDQERNKILAA  344
            +D+E  K++ +
Sbjct  328  LDKETTKVMKS  338


> alv:Alvin_2866  hypothetical protein
Length=89

 Score = 36.6 bits (83),  Expect = 3.2, Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 38/87 (44%), Gaps = 4/87 (5%)

Query  492  ATEEEPLGTLAGR-GVATMYKSGRGLKIKCTEPSMIMALG--SITPRIDYSQGNKWWTRL  548
            + + E L T   R  V  M  +GRGL+    E     A G       +  S+G KW    
Sbjct  2    SDQTETLMTFPCRFAVKAMGPAGRGLEAVVVEIVSRHAEGVDETAISVRESRGGKWIAVT  61

Query  549  QNMDDFHKPTLDAIGFQELIAEEAAAW  575
               +   KP LDAI +QEL A E  AW
Sbjct  62   LTFEAHSKPQLDAI-YQELSAHELVAW  87


> ooe:OEOE_1831  Beta-galactosidase
Length=671

 Score = 38.1 bits (87),  Expect = 7.3, Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 54/124 (44%), Gaps = 8/124 (6%)

Query  345  PSTSAYVVEGATMPYGAATKTI--GLPSYDRREKYNSSNAWYSQAGLAVKTYLSDRFNNW  402
            P+   Y V+  T  YG ++  +  G   Y ++E  N    +  + GL    Y S+R N+W
Sbjct  134  PAIIGYQVDNETKSYGTSSSNVQAGFVKYIKKEFNNDIEKFNREFGL---DYWSNRINSW  190

Query  403  LNTEWIDGTTGGINSITAVDVSDGKLTMDALILQKKIFNMLNRVA--ITDGTYQAWREAT  460
             +   +DGT  G +  T       +L  D L  Q  I N   +    +T      WR+ +
Sbjct  191  EDFPSMDGTING-SLGTEFAKYQRQLVTDYLKWQVNIVNEYKKSKQFVTHNFDFEWRDYS  249

Query  461  YGIR  464
            YGI+
Sbjct  250  YGIQ  253



Lambda      K        H        a         alpha
   0.316    0.132    0.395    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1617285166872