bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: all_orgs
14,240,465 sequences; 5,121,972,263 total letters
Query= Contig-15_CDS_annotation_glimmer3.pl_2_5
Length=489
Score E
Sequences producing significant alignments: (Bits) Value
ava:Ava_2310 phospholipid/glycerol acyltransferase 41.6 0.36
xtr:780137 lmod3; leiomodin 3 (fetal) 40.4 0.99
ana:all5052 hypothetical protein 38.1 4.2
tbr:Tb927.8.7200 Tb08.10K10.560; hypothetical protein 37.7 6.3
clp:CPK_ORF00729 hypothetical protein 35.0 9.5
> ava:Ava_2310 phospholipid/glycerol acyltransferase
Length=458
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/115 (27%), Positives = 53/115 (46%), Gaps = 8/115 (7%)
Query 313 LRSIYSMSSRSVEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGK 372
L S+Y E LS+ Q YT +Y+ +L SP T+ SD+ ++ +RL L + +
Sbjct 242 LESLYPRLLTLAEHLLSLMEQFYTRFYHLKL-SPVTEGASDNRNEALKLRLQALLNAALE 300
Query 373 FI-SFWDITPSSSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVD 426
++++ P R V+ + W Y + R Y D+ GL ++ L D
Sbjct 301 IAEQYFNLQPKGQLSDRCRRVEQAGWNY------IFREDYKDIKGLSAVERALGD 349
> xtr:780137 lmod3; leiomodin 3 (fetal)
Length=611
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/130 (27%), Positives = 59/130 (45%), Gaps = 31/130 (24%)
Query 201 KPYSRFSNGFATSCFFDAKEAVRDSISRPIEETPLSPFLNGVPSLINGKLLAIRPPRSV- 259
K SN TS D IS P+E TP P N NGK+ + P+ +
Sbjct 194 KTVQEISNSVQTS----------DDISDPVENTPEKPPENKP----NGKVGKLNLPKKLT 239
Query 260 VDSCFLRYACNGRLSSHELYWLVRSVSTTLSRSFQTVRRDNPDATLMDVCRLHLRSIYSM 319
+DS F++ + R S ++ T L ++ Q++R +NP DV ++L +I ++
Sbjct 240 LDSSFIKMSA--RPSGNQ---------TNLDKTLQSIRENNP-----DVKEVNLNNIENI 283
Query 320 SSRSVEDFLS 329
+ DF++
Sbjct 284 PKEMLVDFVN 293
> ana:all5052 hypothetical protein
Length=458
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/104 (27%), Positives = 49/104 (47%), Gaps = 8/104 (8%)
Query 324 VEDFLSIENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRLFSCVGKFI-SFWDITPS 382
E LS+ Q YT +Y+ +L SP T+ SD+ ++ +RL L + + ++++ P
Sbjct 253 AEHLLSLMEQFYTRFYHLKL-SPVTEGLSDNRNEALKLRLQALLNASLEIAEQYFNLQPK 311
Query 383 SSYEYIYRTVDLSKWYYSRLSYHMLRSQYTDLVGLVDLDEELVD 426
R V+ + W Y + R Y D+ GL ++ L D
Sbjct 312 GQLSDRCRRVEQAGWNY------IFREDYKDIKGLSAVERALGD 349
> tbr:Tb927.8.7200 Tb08.10K10.560; hypothetical protein
Length=1123
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/117 (25%), Positives = 49/117 (42%), Gaps = 12/117 (10%)
Query 309 CRLHLRSIYSMSSRSVEDFLS--IENQLYTCYYYARLESPTTDVRSDDLFDSDCMRLYRL 366
CR +R + + +S SV + S I + CY RL + R LF +C + +
Sbjct 403 CREPIRHVEASNSGSVTGYESKNIRTAAHACYQVVRLVEVGLEKRLQQLFQKECYEIAQS 462
Query 367 FSCVGKFISFWDITPSSSYEYIYRTVDLSKWY----YSRLSYHMLRSQYTDLVGLVD 419
+C + TP + + +D+ K Y S+ Y QY D++G V+
Sbjct 463 IACRSQS------TPGGRHRKNQQLLDIKKHYGDYLVSKRDYTGAMRQYVDIIGHVE 513
> clp:CPK_ORF00729 hypothetical protein
Length=121
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 28/53 (53%), Gaps = 5/53 (9%)
Query 93 YGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFT 145
YG + + QLF+KRLR I K+ + EYG RPH+H+L+F
Sbjct 67 YGSLVKLHLQLFLKRLRDRISP-----HKIRYFGCGEYGTKLQRPHYHLLIFN 114
Lambda K H a alpha
0.322 0.137 0.418 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1059614129535