bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-8_CDS_annotation_glimmer3.pl_2_6 Length=745 Score E Sequences producing significant alignments: (Bits) Value 585502.HMPREF0645_0935 71.6 2e-10 > 585502.HMPREF0645_0935 Length=519 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 27/271 (10%) Query 488 FTIETLRYVNAYQKFLELNMRKGFSYKQIMQGRWDIDIRFDELLMPEFIGGISRELSMRT 547 F++ +LR A K L + MR G +++ M+ + ++I ++GG +L + Sbjct 262 FSVSSLRSAFAVDKLLSVTMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDLQVSD 321 Query 548 VEQTVDQQGSSSQGQYAEALGSKTGIAGVYGNTSNNIEVF-CDEESYIIGLLTVTPVPIY 606 V QT ++ +Y G IAG + VF E ++ + ++ P Y Sbjct 322 VTQT----SGTTATEYKPEAGYLGRIAGKGTGSGRGRIVFDAKEHGVLMCIYSLVPQIQY 377 Query 607 --TQLLPKDFTYNGLLDHYQPEFDRIGFQPITYKEI---CPMNADNSTSSGFIERTFGYQ 661 T+L P + D + PEF+ +G QP+ I C + N GYQ Sbjct 378 DCTRLDPMVDKLD-RFDFFTPEFENLGMQPLNSSYISSFCTPDPKNP--------VLGYQ 428 Query 662 RPWYEYVAKYDNAHGLFRTDMK----NFVMHRSFTGLPQLGQQFLLVDPNAVNQVFSV-- 715 + EY D HG F + + R +T PQL +DP +N VF V Sbjct 429 PRYSEYKTALDINHGQFAQNDALSSWSVSRFRRWTTFPQLEIADFKIDPGCLNSVFPVEF 488 Query 716 --TEYTDKIFGYVKFNATARLPISRVAIPRL 744 TE TD +FG FN +S +PR+ Sbjct 489 NGTESTDCVFGGCNFNIVKVSDMSVDGMPRV 519 Lambda K H a alpha 0.318 0.134 0.399 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1749684839240