bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-42_CDS_annotation_glimmer3.pl_2_1 Length=98 Score E Sequences producing significant alignments: (Bits) Value 565655.ECBG_02899 33.1 5.0 > 565655.ECBG_02899 Length=156 Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/76 (29%), Positives = 37/76 (49%), Gaps = 18/76 (24%) Query 7 LEDAPAYVSRGQRIMSVLDGSGSVDVLPGRPDVVVEPSDFDKGEKFNPEIEFDPNSFSRM 66 +E PAYV +RIMS L +G ++ G+P NP++ +PN S + Sbjct 49 VETNPAYV---RRIMSDLRIAGLIESQRGKP---------------NPKLTKEPNEISLL 90 Query 67 DKFDGLEVGQELIDSE 82 D + +E Q L+ ++ Sbjct 91 DIYASVEKDQHLLHAD 106 Lambda K H a alpha 0.310 0.132 0.368 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127594040180