bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-3_CDS_annotation_glimmer3.pl_2_3

Length=68
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01606                                                   54.3    2e-08


> 469590.BSCG_01606
Length=69

 Score = 54.3 bits (129),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (66%), Gaps = 3/70 (4%)

Query  1   MRITPQQWIEIVKLISTFIIGVITTLFVQSC--TISMSVSKNNQNSTQKTEQTSTSSIDS  58
           M++T  QW  I++ I T ++ +   + V SC  T+SMSV KNN +STQ+ EQ S S  DS
Sbjct  1   MKLTSDQWNRIIQAIVTAVVTICNIILVSSCAVTMSMSVQKNNSSSTQQIEQKSESRNDS  60

Query  59  TKININPKNF  68
           T ++++P NF
Sbjct  61  TTLDLSP-NF  69



Lambda      K        H        a         alpha
   0.314    0.124    0.334    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126492130520