bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-34_CDS_annotation_glimmer3.pl_2_3

Length=90
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  879309.HMPREF9199_2075                                              36.6    0.42


> 879309.HMPREF9199_2075
Length=3831

 Score = 36.6 bits (83),  Expect = 0.42, Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 14/93 (15%)

Query  2     DQQEAVKWAYGQDVV------------KVTCIKQGEDDKFVLTVGQY--SVTPIIFDTQE  47
             +     K ++G D V            KVT +++G DD   + V Q   S T +  D Q 
Sbjct  3583  NNSNGPKLSFGGDTVNITGGNLNMGGNKVTNVQRGTDDNDAVNVKQLKDSRTTLTSDDQS  3642

Query  48    QAETFLETKFKLTNFDLAVIGAMCQRLNELNEQ  80
                   ET     N+DL+V GA+  R+++LNE+
Sbjct  3643  VVLKKTETADGGLNYDLSVKGAVDPRVDQLNEE  3675



Lambda      K        H        a         alpha
   0.315    0.131    0.371    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126601964700