bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-26_CDS_annotation_glimmer3.pl_2_2 Length=107 Score E Sequences producing significant alignments: (Bits) Value 314282.PCNPT3_02685 34.3 2.5 > 314282.PCNPT3_02685 Length=300 Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (8%) Query 18 YQAEPREVKLRKIISGE---SSSMEDGVFPTIYTEKKD 52 +QA+ + LR+++ G+ S+ EDG+F TIY KD Sbjct 123 FQAKGHDFSLRELLGGQDAISAPFEDGIFSTIYLAPKD 160 Lambda K H a alpha 0.307 0.127 0.344 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 127901841280