bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-25_CDS_annotation_glimmer3.pl_2_2 Length=314 Score E Sequences producing significant alignments: (Bits) Value 406984.CPK_ORF00729 109 3e-26 > 406984.CPK_ORF00729 Length=121 Score = 109 bits (272), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 47/96 (49%), Positives = 63/96 (66%), Gaps = 0/96 (0%) Query 60 FVPCGKCIECRISHSIEWAYRVVAETRAHEHNCMITLTYADEYLPHDMSVSMYEMQTFLK 119 +PC KC CR H+ W+YR V E +E NC +TLTY D++LP S+ +Q FLK Sbjct 21 LMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNCFLTLTYDDKHLPQYGSLVKLHLQLFLK 80 Query 120 RLRKEVQPSAIRFFGCGEYGEQFLRPHYHMVVFGHD 155 RLR + P IR+FGCGEYG + RPHYH+++F +D Sbjct 81 RLRDRISPHKIRYFGCGEYGTKLQRPHYHLLIFNYD 116 Lambda K H a alpha 0.327 0.140 0.441 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 532857258500