bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-23_CDS_annotation_glimmer3.pl_2_6 Length=70 Score E Sequences producing significant alignments: (Bits) Value 629268.PSYAP_09985 33.9 2.6 > 629268.PSYAP_09985 Length=1043 Score = 33.9 bits (76), Expect = 2.6, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (6%) Query 10 ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIKD 58 E A+ P F++ G+ F R Y ASD LR+ L+ Y GIY D D Sbjct 826 EEAFFPTFLKGENGEAFNYFMHSENRNYAAASDILRYRLINEYGGIYLDCDD 877 Lambda K H a alpha 0.334 0.147 0.453 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 125659100840