bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-1_CDS_annotation_glimmer3.pl_2_8 Length=262 Score E Sequences producing significant alignments: (Bits) Value 5141.EFNCRP00000005961 38.5 1.5 > 5141.EFNCRP00000005961 Length=772 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (63%), Gaps = 3/56 (5%) Query 102 LDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILMMAEA 157 L+ K+K +NNYL EG+RL+LD+ A++ DA +G + + E KR +AEA Sbjct 100 LEAKAK--LNNYLLEGKRLKLDIAEARHRDAKKTGPV-VSKVAEEKQKRAEAVAEA 152 Lambda K H a alpha 0.313 0.127 0.364 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 384331210000