bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-18_CDS_annotation_glimmer3.pl_2_3

Length=644
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              63.5    8e-08


> 888743.HMPREF9141_0985
Length=531

 Score = 63.5 bits (153),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 124/312 (40%), Gaps = 51/312 (16%)

Query  372  GVTG----INEASAVDVTD--GKLSMDALNLAQKVYNFLNRIAISGGTYRDWLETVYTGG  425
            GV+G    IN  S + V D     ++D +  A +  N L+        Y   +E  +   
Sbjct  232  GVSGASTFINGVSVLSVNDLRAAFALDKMLEATRRANGLD--------YSSQIEAHFGFR  283

Query  426  NYMERCETPMFEGGVSQEIVFQEVISNS----ASQEEP-LGTLAGRGVTTGRQKGGHIRI  480
                R     F GG    +V  EV++ S     + E P LG L G+GV  G      I  
Sbjct  284  VPESRAGDARFIGGFDNPVVISEVVNQSEFDRGADESPCLGDLGGKGV--GSLNSSSIDF  341

Query  481  KVTEPCYIMCICSITPRIDYGQGNTWDTYLETM--DDWHKPALDGIGYQDSLNGER-AWW  537
             V E   IMCI S+ P+ +Y  G  +D +   +  +D+ +P    +GYQ  +  +  + +
Sbjct  342  DVKEHGIIMCIYSVVPQTEY-NGTYFDPFNRKLRREDFFQPEFADLGYQPVVTSDLISTY  400

Query  538  TDHIASNGGSLTKTAA---------------GKTVAWINYMTNVNRTFGNFAPEMPESFM  582
             D+   +G    K  A               G  V +  Y T+ +  FG F   +  S+ 
Sbjct  401  LDNPVPDGPEKQKRLAAGYPLSSIEANNRLLGWQVRYNEYKTSRDLVFGEFESGLSLSYW  460

Query  583  VLNRNYSMNNNGQIEDLTT----------YIDPVKFNYIFADTNLDAMNFWVQTKFDIKV  632
               R Y    +G+  D             Y++P   N IF  + + A +F V + FD+K 
Sbjct  461  CSPR-YDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKA  519

Query  633  RRLISAKQIPNL  644
             R +S   +  L
Sbjct  520  VRPMSVSGLAGL  531



Lambda      K        H        a         alpha
   0.315    0.133    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1464503415180