bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_6

Length=367
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02723                                                 45.8    0.008


> 483216.BACEGG_02723
Length=368

 Score = 45.8 bits (107),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 108/258 (42%), Gaps = 62/258 (24%)

Query  71   FNKEMW----DYTNYENQKKHLEAAGLNPALLYGMGGGGGA-TAAGAQGLGAGIASGHEM  125
            +  EMW    +Y +   Q+  LEAAGLNP ++   G  G A + +G QG      S    
Sbjct  88   YQTEMWNKQNEYNDPSAQRARLEAAGLNPYMMMNGGSAGVAGSVSGTQGSAPSAGSPSAQ  147

Query  126  GIKQ--------------QGRGMGLQTAAIASQIDLNNSQAEKNRAEAKKTAG-------  164
            G++               QG G  + T    SQ ++ N+QA+  R E K  A        
Sbjct  148  GVQPPTATPYSADYSGVMQGLGHAIDTIMTGSQRNIQNAQADNLRIEGKYIASKAIAELY  207

Query  165  -----VDTNLQNANIEYVIAQ-----------TSNEKVKKGLIYANTRLLDAQEELQRTS  208
                    + +   I+ V++             +NE V++  I A T++   +  L+   
Sbjct  208  KTYNEAKNDDERVAIQRVLSSIQKDLSASQVAVNNENVRQ--IQAQTKIAVTENLLREQQ  265

Query  209  VDY--TKQKTD--------EVRWNIK-LIEK----EVDRLAKEI---NGLDLDNEYKKET  250
            + +   +Q+T          +++  K L EK    E+++LA+ I   NG  + N+Y  ET
Sbjct  266  LKFLPYEQRTQLALGAADIALKYAQKNLTEKQARHEIEKLAETIVRANGQAMQNQYDAET  325

Query  251  LKNRITQTSLAIQQAIAD  268
             ++R+     ++  AI D
Sbjct  326  YRDRVKLVKESLFNAIYD  343



Lambda      K        H        a         alpha
   0.311    0.129    0.354    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 681423348560