bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-16_CDS_annotation_glimmer3.pl_2_9

Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  395495.Lcho_3395                                                    32.7    4.4


> 395495.Lcho_3395
Length=491

 Score = 32.7 bits (73),  Expect = 4.4, Method: Composition-based stats.
 Identities = 16/38 (42%), Positives = 23/38 (61%), Gaps = 0/38 (0%)

Query  5   KQLLENYVVIEIRFKEYKRILIILKGKDSKKQKSKWID  42
           ++L E Y  +E R K YK  +I LK  DSK Q ++ +D
Sbjct  11  ERLEEGYEPVEKRVKNYKEFVIGLKADDSKVQAARCMD  48



Lambda      K        H        a         alpha
   0.321    0.138    0.395    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 125187668910