bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-15_CDS_annotation_glimmer3.pl_2_1

Length=410
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02723                                                 80.1    9e-14


> 483216.BACEGG_02723
Length=368

 Score = 80.1 bits (196),  Expect = 9e-14, Method: Compositional matrix adjust.
 Identities = 85/332 (26%), Positives = 137/332 (41%), Gaps = 50/332 (15%)

Query  1    MDPTVLGAIISAGAGLGSSVASGIASGKMNKKSIK--------YNKWALQEQQRFQSE--  50
            M    +  I+ +  G G+S+  G ++  M  ++ K        +N+    +Q  +  E  
Sbjct  1    MGAAAMTGIVGSAIGAGTSLIGGASTTHMQNQANKEIAQMNNAFNEKMFDKQIAYNKEMY  60

Query  51   QAQLGRDWSEEMMSKANQWNL---------EQWNRENEYNLPVNRKARLLAAQINPALAM  101
            Q QLG  W      KAN W L         E WN++NEYN P  ++ARL AA +NP + M
Sbjct  61   QTQLGDQWKFYDDQKANAWKLYEDNKAYQTEMWNKQNEYNDPSAQRARLEAAGLNPYMMM  120

Query  102  QGGSSVGQAASSPSSASAPSPASPSGASALPLNLQ--RPDYGTGFAQLSSAVNSYFENKQ  159
             GGS+    + S +  SAPS  SPS     P        DY      L  A+++     Q
Sbjct  121  NGGSAGVAGSVSGTQGSAPSAGSPSAQGVQPPTATPYSADYSGVMQGLGHAIDTIMTGSQ  180

Query  160  RDV---------ITEGYGLDNALKATYGDRAY--------RLSLGKTEAEIDNIRASTAK  202
            R++         I   Y    A+   Y  + Y        R+++ +  + I    +++  
Sbjct  181  RNIQNAQADNLRIEGKYIASKAIAELY--KTYNEAKNDDERVAIQRVLSSIQKDLSASQV  238

Query  203  SYADSALVNLQAKEKEILN---------KYLDAGQQLSLFLKIGELATMKTQRELLSAQT  253
            +  +  +  +QA+ K  +          K+L   Q+  L L   ++A    Q+ L   Q 
Sbjct  239  AVNNENVRQIQAQTKIAVTENLLREQQLKFLPYEQRTQLALGAADIALKYAQKNLTEKQA  298

Query  254  RKAIAEEIEVSARARGLKISN-YIAEQTAERL  284
            R  I +  E   RA G  + N Y AE   +R+
Sbjct  299  RHEIEKLAETIVRANGQAMQNQYDAETYRDRV  330



Lambda      K        H        a         alpha
   0.310    0.125    0.349    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 804072904040