bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-13_CDS_annotation_glimmer3.pl_2_4 Length=559 Score E Sequences producing significant alignments: (Bits) Value 469590.BSCG_01608 124 1e-27 > 469590.BSCG_01608 Length=497 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/328 (29%), Positives = 141/328 (43%), Gaps = 73/328 (22%) Query 14 CQHRSFITNRYTGARIAVDCGQCDYCIHKRAQKASMRVKTAGSAFKYSYFVTLTYDNEHI 73 C H I N YT + V CG C C + + + + K++ F+TLTY N I Sbjct 9 CLHPKRIMNPYTKESMVVPCGHCQACTLAKNSRYAFQCDLESYTAKHTLFITLTYANRFI 68 Query 74 PLMRCKVLHSEYEDVVGISGDIHFGDEYHHYIPVSEYQCDDSSALRHIFFEQVQ---GTV 130 P R +F + ++ G Sbjct 69 P--------------------------------------------RAMFVDSIERPYGCD 84 Query 131 PYDREIKEYVPVKDNWFLSIDAIRSFIHKTQALGKTDYPVAEQYGRDNLIPFLNYVDVQN 190 D+E E + D L+ D + ++K G +P+L D+Q Sbjct 85 LIDKETGEILGPAD---LTEDERTNLLNKFYLFGD--------------VPYLRKTDLQL 127 Query 191 YIKRLRKYLFKVLGSYESLHFYAVGEYGPVHFRPHFHLLLFTNSDEVAEVLRQCHDKSWK 250 ++KRLR Y+ K S E + ++AVGEYGPVHFRPH+HLLLF SDE ++ + K+W Sbjct 128 FLKRLRYYVTKQKPS-EKVRYFAVGEYGPVHFRPHYHLLLFLQSDEALQICSENISKAWT 186 Query 251 FGRSDFQRSAGGSASYVSSYVNSLCSAPLLYRS---CRAFRPKSRASVGFFEKGCDFVED 307 FGR D Q S G ++YV+SYVNS C+ P ++++ C + GF + + + Sbjct 187 FGRVDCQVSKGQCSNYVASYVNSSCTIPKVFKASSVCPFSVHSQKLGQGFLDCQREKIYS 246 Query 308 EDPYAQIEKKIDSVVNGRCYNFNGVSVW 335 P I I V+NG+ F+ VW Sbjct 247 LTPENFIRSSI--VLNGKYKEFD---VW 269 Lambda K H a alpha 0.324 0.138 0.423 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1223637212160