bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-8_CDS_annotation_glimmer3.pl_2_8
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
gi|639237431|ref|WP_024568108.1| hypothetical protein 59.7 4e-08
gi|494610273|ref|WP_007368519.1| hypothetical protein 51.2 4e-05
gi|575094324|emb|CDL65715.1| unnamed protein product 48.5 3e-04
gi|547920047|ref|WP_022322418.1| putative uncharacterized protein 47.8 4e-04
gi|575094301|emb|CDL65691.1| unnamed protein product 46.2 0.002
gi|649555290|gb|KDS61827.1| hypothetical protein M095_3809 45.4 0.003
gi|492501772|ref|WP_005867312.1| hypothetical protein 44.7 0.005
gi|647452992|ref|WP_025792810.1| hypothetical protein 42.4 0.037
gi|546189463|ref|WP_021825244.1| hypothetical protein 41.2 0.086
gi|575094659|emb|CDL66002.1| unnamed protein product 40.0 0.15
>gi|639237431|ref|WP_024568108.1| hypothetical protein [Elizabethkingia anophelis]
Length=287
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/52 (56%), Positives = 36/52 (69%), Gaps = 4/52 (8%)
Query 58 KFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVGN 109
K ARE R + M+ +NN YN+P AQMQRLK+AGLNP+LMY +G GN
Sbjct 25 KIARENRA----FALDMWNRNNEYNTPLAQMQRLKEAGLNPNLMYGQGTTGN 72
>gi|494610273|ref|WP_007368519.1| hypothetical protein [Prevotella multiformis]
gi|324988545|gb|EGC20508.1| hypothetical protein HMPREF9141_0987 [Prevotella multiformis
DSM 16608]
Length=437
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/77 (42%), Positives = 39/77 (51%), Gaps = 7/77 (9%)
Query 40 FGNRSNRKASREAFERESKFAREERLAQQQWI-------EQMYEKNNSYNSPAAQMQRLK 92
FG SN+ A A E + ARE Q Q E+M+ + N YNSPAAQMQR
Sbjct 84 FGGHSNKTAQDRANETNLQIAREANQNQYQMFQEQNAFNERMWNQMNQYNSPAAQMQRYT 143
Query 93 DAGLNPDLMYSRGDVGN 109
DAG+NP + GN
Sbjct 144 DAGINPYIAAGNVQTGN 160
>gi|575094324|emb|CDL65715.1| unnamed protein product [uncultured bacterium]
Length=370
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (44%), Positives = 34/62 (55%), Gaps = 11/62 (18%)
Query 58 KFAREERLAQQQWIEQMYE-----------KNNSYNSPAAQMQRLKDAGLNPDLMYSRGD 106
K REE + W ++M E +YN+P+A M+RLKDAGLNPDLMY G
Sbjct 32 KAQREENEKARNWQQKMAEWQVGIERENLADERAYNNPSAVMKRLKDAGLNPDLMYGSGA 91
Query 107 VG 108
G
Sbjct 92 SG 93
>gi|547920047|ref|WP_022322418.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
gi|524592959|emb|CDD13571.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
Length=259
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/37 (57%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
Query 73 QMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVGN 109
+M+ N YNSP AQM RL+ AGLNP+L+Y G GN
Sbjct 24 EMWNMQNQYNSPTAQMSRLRQAGLNPNLVYGSGVTGN 60
>gi|575094301|emb|CDL65691.1| unnamed protein product [uncultured bacterium]
Length=437
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 0/59 (0%)
Query 40 FGNRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNP 98
+G S +K R E F +E Q+ + QM++ N YN+P AQ QRL+ AG+NP
Sbjct 35 WGGSSQQKFERHQAEDARNFTHQENALQRDFARQMWKDTNDYNTPIAQKQRLEQAGMNP 93
>gi|649555290|gb|KDS61827.1| hypothetical protein M095_3809 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649557306|gb|KDS63785.1| hypothetical protein M095_3404 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649559158|gb|KDS65545.1| hypothetical protein M096_4689 [Parabacteroides distasonis str.
3999B T(B) 6]
gi|649560567|gb|KDS66875.1| hypothetical protein M095_2448 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649561016|gb|KDS67303.1| hypothetical protein M095_2410 [Parabacteroides distasonis str.
3999B T(B) 4]
gi|649562727|gb|KDS68911.1| hypothetical protein M096_3341 [Parabacteroides distasonis str.
3999B T(B) 6]
Length=288
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (38%), Positives = 41/72 (57%), Gaps = 7/72 (10%)
Query 45 NRKASREAFERESKFAREERLAQQQWIEQMYEKN-------NSYNSPAAQMQRLKDAGLN 97
N KA ++ + + A+ + QQQ E+ Y+++ N YNSP QM R++ AGLN
Sbjct 24 NNKAVQDTNKANMEIAKYQAQWQQQENEKAYQRSLKMWNLQNEYNSPTQQMARIRAAGLN 83
Query 98 PDLMYSRGDVGN 109
P+L+Y G GN
Sbjct 84 PNLVYGNGVTGN 95
>gi|492501772|ref|WP_005867312.1| hypothetical protein [Parabacteroides distasonis]
gi|409230405|gb|EKN23269.1| hypothetical protein HMPREF1059_03254 [Parabacteroides distasonis
CL09T03C24]
Length=288
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (38%), Positives = 41/72 (57%), Gaps = 7/72 (10%)
Query 45 NRKASREAFERESKFAREERLAQQQWIEQMYEKN-------NSYNSPAAQMQRLKDAGLN 97
N KA ++ + + A+ + QQQ E+ Y+++ N YNSP QM R++ AGLN
Sbjct 24 NNKAVQDTNKANMEIAKYQAQWQQQENEKAYQRSLNMWNLQNEYNSPTQQMARIRAAGLN 83
Query 98 PDLMYSRGDVGN 109
P+L+Y G GN
Sbjct 84 PNLVYGNGVTGN 95
>gi|647452992|ref|WP_025792810.1| hypothetical protein [Prevotella histicola]
Length=424
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 39/68 (57%), Gaps = 4/68 (6%)
Query 42 NRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLM 101
N++N + +RE + + +E + E+MY + N+YN+P+AQMQR +AG+NP +
Sbjct 30 NQTNLQIARETNQMNYQLFQESN----AFNEKMYHEANAYNTPSAQMQRYAEAGINPYIA 85
Query 102 YSRGDVGN 109
GN
Sbjct 86 AGNVQTGN 93
>gi|546189463|ref|WP_021825244.1| hypothetical protein [Prevotella salivae]
gi|544001992|gb|ERK01416.1| hypothetical protein HMPREF9145_2738 [Prevotella salivae F0493]
Length=322
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/38 (45%), Positives = 26/38 (68%), Gaps = 0/38 (0%)
Query 72 EQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVGN 109
+Q+ N+YN+P QMQR ++AGLNP +M + + GN
Sbjct 41 QQLVNDANAYNTPGMQMQRFQNAGLNPYMMLGQVNAGN 78
>gi|575094659|emb|CDL66002.1| unnamed protein product [uncultured bacterium]
Length=204
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/29 (59%), Positives = 22/29 (76%), Gaps = 0/29 (0%)
Query 79 NSYNSPAAQMQRLKDAGLNPDLMYSRGDV 107
N YN+P QM+RL+ AGLNP+L+Y G V
Sbjct 39 NDYNNPINQMKRLQAAGLNPNLVYGSGSV 67
Lambda K H a alpha
0.313 0.126 0.375 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 434599334190