bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-6_CDS_annotation_glimmer3.pl_2_6

Length=67
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|490418707|ref|WP_004291030.1|  hypothetical protein                39.3    0.014
gi|496050826|ref|WP_008775333.1|  predicted protein                   36.2    0.18


>gi|490418707|ref|WP_004291030.1| hypothetical protein [Bacteroides eggerthii]
 gi|217986634|gb|EEC52968.1| hypothetical protein BACEGG_02719 [Bacteroides eggerthii DSM 
20697]
Length=64

 Score = 39.3 bits (90),  Expect = 0.014, Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 0/36 (0%)

Query  32  SCTMSMSIAKNNNNATQQTEQKATSEVKNDSINLKF  67
           SCTMSMSI+KNN N+ Q TEQ   + V + +++L +
Sbjct  28  SCTMSMSISKNNTNSNQSTEQSQATSVDSTTVDLNY  63


>gi|496050826|ref|WP_008775333.1| predicted protein [Bacteroides sp. 2_2_4]
 gi|229448890|gb|EEO54681.1| hypothetical protein BSCG_01606 [Bacteroides sp. 2_2_4]
Length=69

 Score = 36.2 bits (82),  Expect = 0.18, Method: Compositional matrix adjust.
 Identities = 20/34 (59%), Positives = 25/34 (74%), Gaps = 2/34 (6%)

Query  34  TMSMSIAKNNNNATQQTEQKATSEVKNDSINLKF  67
           TMSMS+ KNN+++TQQ EQK  SE +NDS  L  
Sbjct  34  TMSMSVQKNNSSSTQQIEQK--SESRNDSTTLDL  65



Lambda      K        H        a         alpha
   0.303    0.111    0.293    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 438252188976