bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters



Query= Contig-6_CDS_annotation_glimmer3.pl_2_1

Length=369
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|575094319|emb|CDL65706.1|  unnamed protein product                 38.9    5.3
gi|281209474|gb|EFA83642.1|  hypothetical protein PPL_02708           38.5    6.2


>gi|575094319|emb|CDL65706.1| unnamed protein product [uncultured bacterium]
Length=396

 Score = 38.9 bits (89),  Expect = 5.3, Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (5%)

Query  25   SSLPQMAMSAGGGLFGSISAQKQQKRAHAYNLEYMDKQFQQNKEAAAINQAYAKELWD--  82
            S+L    ++  G L   + +    K+A  Y L+ + +  Q N+E A  N  + + +W+  
Sbjct  22   SALGAGLIAGAGSLINGLFSSNGSKQAAKYQLQAVRETNQANREIADQNNKFNERMWNLQ  81

Query  83   --YTSFENQRKHMEAANLNPALM  103
              Y   + QR  +EAA LNP LM
Sbjct  82   NEYNRPDMQRARLEAAGLNPYLM  104


>gi|281209474|gb|EFA83642.1| hypothetical protein PPL_02708 [Polysphondylium pallidum PN500]
Length=310

 Score = 38.5 bits (88),  Expect = 6.2, Method: Compositional matrix adjust.
 Identities = 33/172 (19%), Positives = 79/172 (46%), Gaps = 26/172 (15%)

Query  184  INKQTEVEEEVKQLT-AANYFKVLKEQDEVWQRARLLSTQADIAEKTKQAEIE-SVYVKN  241
            + K  E E+E+++L    ++F +L + DE W           +A+   +  +  S+ ++N
Sbjct  115  VEKSNETEQELERLAKTPHFFPLLNDNDESWITPN--GNPLSVADMDNRGALNISIDIQN  172

Query  242  WLNTATG---------LEKLAQIEMHEAE------AKQILEETRW------IAFDMQTRR  280
            +L  +TG         + ++ ++EM +++      + ++ E T +      +   ++   
Sbjct  173  YLKNSTGYIVEKQMEIINRIREVEMKQSKKLTHSMSTRVSETTHYNYGFKEVTDKVKFNI  232

Query  281  ITAEAAKKRVGVMVQELEKKYKFQNQENIREWLFGSIDALAKGANSVSNFLP  332
            I   A   R+G +++++E       +ENI+E ++ S+   +   N    F+P
Sbjct  233  IKTNALVYRIGDLIEQIESALPENERENIKELIYASLPRNSPTYNP-PKFVP  283



Lambda      K        H        a         alpha
   0.313    0.125    0.346    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2257338701640