bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-4_CDS_annotation_glimmer3.pl_2_3

Length=67
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|496050826|ref|WP_008775333.1|  predicted protein                   47.8    2e-05
gi|490418707|ref|WP_004291030.1|  hypothetical protein                38.5    0.026
gi|330930892|ref|XP_003303187.1|  hypothetical protein PTT_15305      33.5    8.0


>gi|496050826|ref|WP_008775333.1| predicted protein [Bacteroides sp. 2_2_4]
 gi|229448890|gb|EEO54681.1| hypothetical protein BSCG_01606 [Bacteroides sp. 2_2_4]
Length=69

 Score = 47.8 bits (112),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 26/69 (38%), Positives = 41/69 (59%), Gaps = 2/69 (3%)

Query  1   MKITPQQWIEVVKLISTFIIGLITALCIHSC--TASMSVFWKNSNSNQESQQTTRQSVDS  58
           MK+T  QW  +++ I T ++ +   + + SC  T SMSV   NS+S Q+ +Q +    DS
Sbjct  1   MKLTSDQWNRIIQAIVTAVVTICNIILVSSCAVTMSMSVQKNNSSSTQQIEQKSESRNDS  60

Query  59  TRIDVQPNF  67
           T +D+ PNF
Sbjct  61  TTLDLSPNF  69


>gi|490418707|ref|WP_004291030.1| hypothetical protein [Bacteroides eggerthii]
 gi|217986634|gb|EEC52968.1| hypothetical protein BACEGG_02719 [Bacteroides eggerthii DSM 
20697]
Length=64

 Score = 38.5 bits (88),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 20/38 (53%), Positives = 28/38 (74%), Gaps = 1/38 (3%)

Query  26  LCIHSCTASMSVFWKNSNSNQESQQTTRQSVDSTRIDV  63
           LC+ SCT SMS+   N+NSNQ ++Q+   SVDST +D+
Sbjct  25  LCV-SCTMSMSISKNNTNSNQSTEQSQATSVDSTTVDL  61


>gi|330930892|ref|XP_003303187.1| hypothetical protein PTT_15305 [Pyrenophora teres f. teres 0-1]
 gi|311320953|gb|EFQ88712.1| hypothetical protein PTT_15305 [Pyrenophora teres f. teres 0-1]
Length=380

 Score = 33.5 bits (75),  Expect = 8.0, Method: Composition-based stats.
 Identities = 18/61 (30%), Positives = 34/61 (56%), Gaps = 1/61 (2%)

Query  8   WIEVVKLISTFIIGLITALCIHSCTASMSVFWKNSNSNQESQQTTRQS-VDSTRIDVQPN  66
           WIE  KL  TFI+  + +  + + TASM ++ + ++  Q+ +Q  + S  D   I+++  
Sbjct  6   WIEEEKLKKTFIVATLASTLVGTFTASMGLWERVADRRQQHRQKAKDSKQDGEIIELKKQ  65

Query  67  F  67
           F
Sbjct  66  F  66



Lambda      K        H        a         alpha
   0.319    0.126    0.376    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 438252188976