bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-42_CDS_annotation_glimmer3.pl_2_3 Length=64 Score E Sequences producing significant alignments: (Bits) Value gi|443926247|gb|ELU44956.1| hypothetical protein AG1IA_01013 32.7 5.2 >gi|443926247|gb|ELU44956.1| hypothetical protein AG1IA_01013 [Rhizoctonia solani AG-1 IA] Length=120 Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query 5 VERFGLHSSVSRRASYTW--EQKQMMRFAASSRSMPDFDPPTWLDLD 49 +E G V R Y+W +K ++ A SR +PD +PPT DL+ Sbjct 63 LENLGNEEIVKVRTYYSWLSSEKSVIPSRAMSRQVPDREPPTQFDLN 109 Lambda K H a alpha 0.326 0.134 0.450 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 442369130868