bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-26_CDS_annotation_glimmer3.pl_2_7 Length=137 Score E Sequences producing significant alignments: (Bits) Value gi|568293148|gb|ETN80369.1| hypothetical protein NECAME_18023 39.7 0.25 gi|649555288|gb|KDS61825.1| hypothetical protein M095_3808 38.9 0.43 gi|649562725|gb|KDS68909.1| hypothetical protein M096_3339 38.9 0.45 gi|547920048|ref|WP_022322419.1| putative replication protein 38.5 0.76 gi|492501778|ref|WP_005867316.1| hypothetical protein 38.1 0.92 gi|653053760|ref|WP_027305279.1| biopolymer transporter ExbD 35.4 4.0 >gi|568293148|gb|ETN80369.1| hypothetical protein NECAME_18023 [Necator americanus] Length=345 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (8%) Query 4 RDEANPEFNGKIFTSKGIGIGYINKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKL 63 RD+ PEF+ SKG+G+ Y+ + H+ + + G ++A+P YY+QK+ Sbjct 165 RDDRVPEFS---LMSKGMGVSYLTPQMVEYHK--EDISRLFCTREGGSRIAMPRYYRQKI 219 Query 64 WTDQE 68 ++D + Sbjct 220 YSDDD 224 >gi|649555288|gb|KDS61825.1| hypothetical protein M095_3808 [Parabacteroides distasonis str. 3999B T(B) 4] gi|649560564|gb|KDS66872.1| hypothetical protein M095_2449 [Parabacteroides distasonis str. 3999B T(B) 4] gi|649561011|gb|KDS67298.1| hypothetical protein M095_2409 [Parabacteroides distasonis str. 3999B T(B) 4] Length=284 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query 10 EFNGKIFTSKGIGIGY--INKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKLWTDQ 67 E+ + SK GIGY + + L+ +R + + RA +G+++A+P YY KL+ D Sbjct 171 EYQPFMLCSKMPGIGYHFLREQILDFYRLHPR---DYVRAFNGMRMAMPRYYADKLYDDD 227 Query 68 ERESLRIIKE 77 +E L+ ++E Sbjct 228 MKEYLKELRE 237 >gi|649562725|gb|KDS68909.1| hypothetical protein M096_3339 [Parabacteroides distasonis str. 3999B T(B) 6] Length=250 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query 10 EFNGKIFTSKGIGIGY--INKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKLWTDQ 67 E+ + SK GIGY + + L+ +R + + RA +G+++A+P YY KL+ D Sbjct 137 EYQPFMLCSKMPGIGYHFLREQILDFYRLHPR---DYVRAFNGMRMAMPRYYADKLYDDD 193 Query 68 ERESLRIIKE 77 +E L+ ++E Sbjct 194 MKEYLKELRE 203 >gi|547920048|ref|WP_022322419.1| putative replication protein [Parabacteroides merdae CAG:48] gi|524592960|emb|CDD13572.1| putative replication protein [Parabacteroides merdae CAG:48] Length=278 Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 3/59 (5%) Query 20 GIGIGYINKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKLWTDQERESLRIIKEE 78 GIG G++ + + +R + + RA +G K+A+P YY KL+ D + L+ ++EE Sbjct 178 GIGFGFMKADIIEFYR---RHPRDYVRAWAGHKMAMPRYYADKLYDDDMKAFLKEMREE 233 >gi|492501778|ref|WP_005867316.1| hypothetical protein [Parabacteroides distasonis] gi|409230407|gb|EKN23271.1| hypothetical protein HMPREF1059_03256 [Parabacteroides distasonis CL09T03C24] Length=284 Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query 10 EFNGKIFTSKGIGIGY--INKNSLNKHRYQDKFTEETYRAASGIKLALPTYYKQKLWTDQ 67 E+ + S+ GIGY + + L+ +R + + RA +G+++A+P YY KL+ D Sbjct 171 EYQPFMLCSRIPGIGYHFLREQILDFYRLHPR---DYVRAFNGMRMAMPRYYADKLYDDD 227 Query 68 ERESLRIIKE 77 +E L+ ++E Sbjct 228 MKEYLKELRE 237 >gi|653053760|ref|WP_027305279.1| biopolymer transporter ExbD [Campylobacter cuniculorum] Length=129 Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (7%) Query 44 TYRAASGIKLALPTYYKQKLWTDQERESLRIIKEEQQVKYYNKTPIKVETLEQYKEYVNA 103 T+ A IK+ LP + L D+ +E L I+ +EQ Y N K+ +EQ K+ +NA Sbjct 31 TFIAHGQIKINLPIS-ENSLSVDENKEKLSILIDEQNAFYIND---KISDIEQLKQAINA 86 Query 104 V 104 + Sbjct 87 L 87 Lambda K H a alpha 0.312 0.130 0.374 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 439745511555