bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-24_CDS_annotation_glimmer3.pl_2_1 Length=237 Score E Sequences producing significant alignments: (Bits) Value gi|518992347|ref|WP_020148222.1| hypothetical protein 38.1 3.6 gi|532002403|ref|XP_005345458.1| PREDICTED: liver carboxylestera... 38.1 4.8 gi|532002405|ref|XP_005345459.1| PREDICTED: liver carboxylestera... 38.1 5.1 >gi|518992347|ref|WP_020148222.1| hypothetical protein [Verrucomicrobia bacterium SCGC AAA164-E04] Length=276 Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/107 (29%), Positives = 49/107 (46%), Gaps = 16/107 (15%) Query 62 TSIIAAFAAYFTVSCSYTQKVFRHGV-------------HHDTVKVESVIKSRNLSCLTK 108 + I A AAYF ++ SY +K RH + H+ K R ++ T+ Sbjct 35 ATTIIAIAAYF-LTVSYIRKPLRHEISAIPPRRSSLWRSHYSIPKYVFGQPERWMAFRTR 93 Query 109 NLGTPSHSLSSSNLELISWKHSSSLAPTMPSTVTTSLFGLPWQIVFG 155 N+GT ++L +N E+ SW+ S A +T + G W +VFG Sbjct 94 NIGTVRNALGLTNTEVCSWQQGLSKATERHLFITPPIRG--WVLVFG 138 >gi|532002403|ref|XP_005345458.1| PREDICTED: liver carboxylesterase-like isoform X1 [Microtus ochrogaster] Length=557 Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query 90 DTVKVES--VIK------SRNLSCLTKNLGTPSHSLSSSNLELISWKHSSSLAPTMPSTV 141 D VK ES +IK S + CL N+ TP+H+L SNL ++ W H L+ + S V Sbjct 99 DAVKSESLAMIKWSMPSISMSEDCLFLNIYTPAHALEGSNLTVMVWIHGGGLSRGLASIV 158 Query 142 TTSLFGLPWQIV 153 S+ +V Sbjct 159 DGSMLAAKEDVV 170 >gi|532002405|ref|XP_005345459.1| PREDICTED: liver carboxylesterase-like isoform X2 [Microtus ochrogaster] Length=557 Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 36/72 (50%), Gaps = 8/72 (11%) Query 90 DTVKVES--VIK------SRNLSCLTKNLGTPSHSLSSSNLELISWKHSSSLAPTMPSTV 141 D VK ES +IK S + CL N+ TP+H+L SNL ++ W H L+ + S V Sbjct 99 DAVKSESLAMIKWSMPSISMSEDCLFLNIYTPAHALEGSNLTVMVWIHGGGLSRGLASIV 158 Query 142 TTSLFGLPWQIV 153 S+ +V Sbjct 159 DGSMLAAKEDVV 170 Lambda K H a alpha 0.322 0.132 0.420 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 992141587560