bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-21_CDS_annotation_glimmer3.pl_2_7

Length=107
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|566217273|gb|ETI82950.1|  hypothetical protein Q618_VCMC00001G...  34.7    6.8
gi|497673322|ref|WP_009987506.1|  2-C-methyl-D-erythritol 4-phosp...  34.3    9.3


>gi|566217273|gb|ETI82950.1| hypothetical protein Q618_VCMC00001G0531 [Varibaculum cambriense 
DORA_20]
Length=192

 Score = 34.7 bits (78),  Expect = 6.8, Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (53%), Gaps = 3/57 (5%)

Query  2    AQAAYYYAAGETQKAE-AKMLEVKKRTEEATAELRELQYWTEIANTIIKLAQVVGNL  57
            A A+++ AAG   ++  A   E+KKR+E A  ELR    WT + N +   A  +  L
Sbjct  114  ADASFFQAAGSVSRSHSASFGELKKRSESAEMELR--ASWTPLENNLAPHAAAISRL  168


>gi|497673322|ref|WP_009987506.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Ruminococcus 
flavefaciens]
Length=228

 Score = 34.3 bits (77),  Expect = 9.3, Method: Compositional matrix adjust.
 Identities = 18/57 (32%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query  47   IIKLAQVVGNLTIGGKTGKLIREYTEKRMSETPPKNSTTVTQH---FDPEMQFKGVD  100
            +IK A+V G  T+G      I+   +  +++TPP+N   +TQ    F   + F+G+D
Sbjct  118  VIKDAKVFGGATLGVPVKDTIKTVDDGLITDTPPRNKLFITQTPQIFKRSLYFEGID  174



Lambda      K        H        a         alpha
   0.310    0.124    0.345    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 428991919341