bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-20_CDS_annotation_glimmer3.pl_2_4
Length=760
Score E
Sequences producing significant alignments: (Bits) Value
gi|575094326|emb|CDL65712.1| unnamed protein product 998 0.0
gi|547920049|ref|WP_022322420.1| capsid protein VP1 131 9e-29
gi|639237429|ref|WP_024568106.1| hypothetical protein 129 2e-28
gi|609718276|emb|CDN73650.1| conserved hypothetical protein 123 3e-26
gi|649569140|gb|KDS75238.1| capsid family protein 115 3e-24
gi|649555287|gb|KDS61824.1| capsid family protein 115 1e-23
gi|530695351|gb|AGT39907.1| major capsid protein 113 6e-23
gi|492501782|ref|WP_005867318.1| hypothetical protein 111 2e-22
gi|575094431|emb|CDL65804.1| unnamed protein product 105 2e-20
gi|575096093|emb|CDL66973.1| unnamed protein product 105 2e-20
>gi|575094326|emb|CDL65712.1| unnamed protein product [uncultured bacterium]
Length=758
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/782 (66%), Positives = 596/782 (76%), Gaps = 46/782 (6%)
Query 1 MASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
MASVFNKIGD+KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM
Sbjct 1 MASVFNKIGDIKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
Query 61 PMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSP 120
PMMFPIQTKMKAYLSFYKVPLRTLW DYMDFISSDNTEE++PPYM+F DY+EGG L+P
Sbjct 61 PMMFPIQTKMKAYLSFYKVPLRTLWADYMDFISSDNTEEFQPPYMSFDSTDYSEGGTLAP 120
Query 121 SGLGDYFGIPTNQQVSSTPIGDFAVQF-SQSKFDVDGHILRVNLN---GSLNDAGVLTEG 176
SGLGDYFGIPT+ V + P+ + S+ V N N G + L+
Sbjct 121 SGLGDYFGIPTDNIVPTIPVTGYTTLVRSEDPSIVQPTDQNYNWNSFPGDMTRVTALSSS 180
Query 177 DLKDGLTVSGTCNNGLTELAFVPLVSEYTGKSELYKSQAVFLNFTFWLELRTNTTNPVLE 236
+ + + + L + GK++L+K + + T L +R ++ P
Sbjct 181 ETLPSIYIGSDFDRNLKPSWGA--ICWIQGKNDLFKRRLMRFVQTITLTVRPDS--PADN 236
Query 237 LYKKCFGFEFISSINIPPTTSPGQSPIDRVPMSP--AQVVIRQSP----INDG-MTRITA 289
+++ G +P SP A +I P DG + R
Sbjct 237 FFRR------------------GGTPCVFRSSSPTLADSIIPYGPRWYNTYDGTLVRHVL 278
Query 290 RVRIKGYIDAF---------GNISS--KLYLAVRQASQFWNSESNNHTLRFNYVGFDDFS 338
+ GY + G+I++ + L++ ++ N +S N+T + + FD
Sbjct 279 SSNLIGYTLQYSFEYGTGDDGSIANLQSICLSLPSCTELCN-DSGNNTFKVG-ITFDKLD 336
Query 339 VTNYYAGVTPYYGVGSTDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFI 398
V +G PYYG + KAIK+SAYPFRAYEA+YNAYIRNTRNNPF+LNGKKTYNR+I
Sbjct 337 VFIGSSGKYPYYGSANMSDKAIKLSAYPFRAYEAIYNAYIRNTRNNPFVLNGKKTYNRWI 396
Query 399 TNDAGGADSLTPKSLFYANWQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVV 458
T DAGG+D+LTP+ L +ANWQSDAYT+ALTAPQQG+APLVGLTTYE +S+N+AGHEVT V
Sbjct 397 TTDAGGSDTLTPRDLRFANWQSDAYTTALTAPQQGVAPLVGLTTYEIRSVNDAGHEVTTV 456
Query 459 NTAIVDEDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNA 518
NTAIVDE+GNA+KVDFESNGEALKGVNYTPLKAGEA+NMQSLVSPVTSGISINDFRNVNA
Sbjct 457 NTAIVDEEGNAYKVDFESNGEALKGVNYTPLKAGEAVNMQSLVSPVTSGISINDFRNVNA 516
Query 519 YQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTG 578
YQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVET+ +G
Sbjct 517 YQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETTGSG 576
Query 579 AYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLD 638
+YVG+LGSQ+GLATCFGNTDGSISVFCDEESIV+G+M+V+PMPVYDSLLPKWLTYRERLD
Sbjct 577 SYVGSLGSQSGLATCFGNTDGSISVFCDEESIVMGIMYVMPMPVYDSLLPKWLTYRERLD 636
Query 639 SFNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLR 698
SFNPEFDHIGYQPIY +EL +Q Q ++DP TVFGYQRPWYEYV KPDRAHGLFLSSLR
Sbjct 637 SFNPEFDHIGYQPIYAKELGPMQCVQDDIDPNTVFGYQRPWYEYVAKPDRAHGLFLSSLR 696
Query 699 NFIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDCTAQLPISRVVVPR 758
NFIM+RSF +VPELG+ FT M+PG VNNVFSVTEV DKILGQIHFDCTAQLPISRVVVPR
Sbjct 697 NFIMFRSFDNVPELGQSFTVMQPGSVNNVFSVTEVSDKILGQIHFDCTAQLPISRVVVPR 756
Query 759 LE 760
LE
Sbjct 757 LE 758
>gi|547920049|ref|WP_022322420.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
gi|524592961|emb|CDD13573.1| capsid protein VP1 [Parabacteroides merdae CAG:48]
Length=553
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 179/426 (42%), Gaps = 54/426 (13%)
Query 359 AIKISAYPFRAYEAVYNAYIRN---TRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFY 415
++SA PFRAY+ +YN Y R+ T F L T GG + SL
Sbjct 157 GFQVSALPFRAYQLIYNEYYRDQNLTEPIDFTLGSGTT--------VGGDQLMALMSLRR 208
Query 416 ANWQSDAYTSALTAPQQG---IAPLVGL-----TTYETKS-----INEAGHEVTVVNTAI 462
W+ D +TSAL Q+G P+ G YE +S ++ +G E
Sbjct 209 RAWEKDYFTSALPWLQRGPEVTVPVQGAGGSMDVVYERQSDSQKWVDSSGREF------- 261
Query 463 VDEDGNAFKVDF----ESNGEALKGVNYTPLKAGEAL--NMQSLVSPVTSGISINDFRNV 516
E+G+A+ + + N + VN L N V+ GI+IND R
Sbjct 262 --ENGHAYDITMARANDPNSALMVAVNGGTNNRAPELDPNGTLKVNVDEMGININDLRTS 319
Query 517 NAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSN 576
NA QR+ E N G Y E I F V L P++LGG I V+ + QT T
Sbjct 320 NALQRWFERNARGGSRYIEQILSHFGVRSSDARLQRPQFLGGGRMPISVSEVLQTSSTDE 379
Query 577 TG--AYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYR 634
T A + G AG+ F + + +E +IG+M + P Y +P+ T
Sbjct 380 TSPQANMAGHGISAGINNGFKH-------YFEEHGYIIGIMSITPRSGYQQGVPRDFTKF 432
Query 635 ERLDSFNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFL 694
+ +D + PEF H+ Q I +EL + +N FGY + EY P AHG F
Sbjct 433 DNMDFYFPEFAHLSEQEIKNQELFVSEDAAYN---NGTFGYTPRYAEYKYHPSEAHGDFR 489
Query 695 SSLRNFIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEV-GDKILGQIHFDCTAQLPISR 753
+L + + R F D P L F KP N VF+ +E DK Q++ D A + +
Sbjct 490 GNLSFWHLNRIFEDKPNLNTTFVECKPS--NRVFATSETEDDKFWVQMYQDVKALRLMPK 547
Query 754 VVVPRL 759
P L
Sbjct 548 YGTPML 553
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/139 (26%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query 1 MASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
MA++FN I + +RN+F+ S+++ T ++G + P+ V R+K E +R
Sbjct 1 MANIFNSIRMKR--PRRNAFNLSYESKLTLNMGELVPIMCMPVVSGDKFRVKTESLVRLA 58
Query 61 PMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNE------ 114
P++ P+ ++ + ++ VP R +W ++ DFI+ E P + +N +
Sbjct 59 PLVAPMMHRVNVFTHYFFVPNRLVWNEWEDFITKGVDGEDMPMFPKIQINQDSHLVSSAS 118
Query 115 --GGALSPSGLGDYFGIPT 131
S L DY G+PT
Sbjct 119 LIKEYFGDSSLWDYLGLPT 137
>gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis]
Length=546
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/429 (28%), Positives = 185/429 (43%), Gaps = 44/429 (10%)
Query 350 YGVGSTDHKAIKISAYPFRAYEAVYNAYIR--NTRNNPFILNGKKTYNRFITNDAGGADS 407
+ VG+ ++S PF AY+ +++ Y R N ++ F+ FI G +
Sbjct 127 FAVGNDGVLPDRVSMLPFLAYQKIWDEYYRDENLIDSVFVDKNGDKRELFID----GINY 182
Query 408 LTP------KSLF---YANWQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGH----- 453
P + LF W D +TSAL Q+G A + L N G+
Sbjct 183 WNPSLPYEFRQLFDIKKRAWHHDYFTSALPFAQKGAAVKMPLQMTADLFYNPGGNTFVKK 242
Query 454 -EVTVVNTAIVDEDGNA-------FKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVT 505
+ ++ +T EDG+ V+ S G N P+ + N+ +
Sbjct 243 PDGSLSHTGFRLEDGSVPADGIGHLMVETSSTG------NSNPVNIDNSSNLGVDLK-TA 295
Query 506 SGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVV 565
SG +IND R Q +LE N G Y E I F V L PE+LGG I++
Sbjct 296 SGSTINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSDGRLQRPEFLGGNKTPILI 355
Query 566 NPITQTVETSNTGAYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDS 625
+ + Q T +T G+ AG G +G S F +E VIG+M VIP Y
Sbjct 356 SEVLQQSSTDSTTPQ----GNMAGHGISVGK-EGGFSKFFEEHGYVIGLMSVIPKTSYSQ 410
Query 626 LLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQK 685
+P+ + ++ D F P+F+HIG QP+Y +E+ A + D VFGY + EY
Sbjct 411 GIPRHFSKFDKFDYFWPQFEHIGEQPVYNKEIFAKNVGDY--DSGGVFGYVPRYSEYKYS 468
Query 686 PDRAHGLFLSSLRNFIMYRSFVDV--PELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHF 743
P HG F +L + + R F P+L +DF + ++ +F+V + DK ++
Sbjct 469 PSTIHGDFKDTLYFWHLGRIFDSSAPPKLNRDFIEVNKSGLSRIFAVEDNSDKFYCHLYQ 528
Query 744 DCTAQLPIS 752
TA+ +S
Sbjct 529 KITAKRKMS 537
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query 3 SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPM 62
S+F+K+ V K ++F+ S+D F+ + G + P+ + + P I I P+ R PM
Sbjct 2 SIFSKV--VSKAPKSSTFNMSYDRKFSMNFGDLVPIHCQEIVPGDKISINPQHMTRLAPM 59
Query 63 MFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNT---EEYEPPYMNFSVNDYNEGGALS 119
+ P+ ++ ++ ++ VP R LWK++ FI+ + P N V
Sbjct 60 LAPVMHEVNVFIHYFFVPNRILWKNWEAFITGGQSGLDAHMLPVVQNLPV---------P 110
Query 120 PSGLGDYFGIPTNQQVSSTPIGDFAV 145
S LGDY G+P + G FAV
Sbjct 111 KSSLGDYLGLPLTE-------GRFAV 129
>gi|609718276|emb|CDN73650.1| conserved hypothetical protein [Elizabethkingia anophelis]
Length=537
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 177/411 (43%), Gaps = 41/411 (10%)
Query 362 ISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYA----- 416
++ PF AY+ +++ + R+ + + ND +L P S F
Sbjct 139 VNLLPFLAYQKIWDEFYRDENLIQPLFRDSNGNPVKMFNDGINDHNLPPYSKFTELFKMR 198
Query 417 --NWQSDAYTSALTAPQQGIAPLVGL-------TTYETKSINEAGHEVTVVNTAIVDEDG 467
W D +TSAL Q+G A + + TYE S T I D G
Sbjct 199 KRAWHHDYFTSALPFAQKGNAVKIPIFPQGNVPLTYEMGS-----------QTFIKDMAG 247
Query 468 N-AFKVDFES--NGEALKGVNYTPLKAGEALNMQ-SLVSPVTSGISINDFRNVNAYQRYL 523
N A D S NG L+ V+ PL + N++ ++ S S ++ND R Q +L
Sbjct 248 NPAPNKDLRSDVNGN-LQDVSGQPLSLDPSKNLKLNMASENVS--TVNDLRRAFKLQEWL 304
Query 524 ELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGA 583
E N G Y E I F V L PE+LGG I+++ + Q T +T
Sbjct 305 EKNARAGSRYAESILSFFGVKTSDGRLQRPEFLGGNKSPIMISEVLQQSATDSTTPQ--- 361
Query 584 LGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPE 643
G+ AG G DG S F +E VIG+M VIP Y +P+ + ++ D F P+
Sbjct 362 -GNMAGHGIGIGK-DGGFSRFFEEHGYVIGLMSVIPKTSYSQGIPRHFSKSDKFDYFWPQ 419
Query 644 FDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMY 703
F+HIG QP+Y +E+ A F D VFGY + EY P HG F L + +
Sbjct 420 FEHIGEQPVYNKEIFAKNIDAF--DSEAVFGYLPRYSEYKFSPSTVHGDFKDDLYFWHLG 477
Query 704 RSF-VDVPE-LGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDCTAQLPIS 752
R F D P L + F ++ +F+V + DK ++ TA+ +S
Sbjct 478 RIFDTDKPPVLNQSFIECDKNALSRIFAVEDDTDKFYCHLYQKITAKRKMS 528
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (11%)
Query 3 SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPM 62
S+F+K+ K ++F+ S+D F+ + G + P+ + V P I I P+ R PM
Sbjct 2 SIFSKVA--SKAPKSSTFNMSYDRKFSMNFGDLVPIHCQEVIPGDKISINPQHMTRLAPM 59
Query 63 MFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNT---EEYEPPYMNFSVNDYNEGGALS 119
+ P+ ++ ++ ++ VP R +W ++ FI+ + + P N V S
Sbjct 60 IAPVMHEVNVFIHYFFVPNRIIWSNWEQFITGGESGLDQHLMPRVGNLPV---------S 110
Query 120 PSGLGDYFGIP 130
L D+ G+P
Sbjct 111 KGSLADHLGLP 121
>gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str.
3999B T(B) 6]
Length=390
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 171/416 (41%), Gaps = 44/416 (11%)
Query 359 AIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYAN- 417
K+SA PFRAY +YN Y R+ T IT D+G SL+ +
Sbjct 4 GFKVSALPFRAYHLIYNEYYRDQ---------NLTSELEITLDSGNYQLPVNSSLWQLHR 54
Query 418 --WQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVVNTAIVDEDGNAFKVDFE 475
W+ D +TSAL Q+G P V T IN G + + F
Sbjct 55 RAWEKDYFTSALPWVQRG--PEV------TVPINGGGEIPVEMKEGFAAQKITTFPDRKP 106
Query 476 SNGEALKGVNYTPLKAGE--ALNMQSLVSPVT-------SGISINDFRNVNAYQRYLELN 526
+G + + L G+ ++ Q+L+ P G++IND R NA QR+ E N
Sbjct 107 ISGSEVLYSAPSVLSYGQIGSIKGQALIEPDNFVVNTDQMGVNINDIRTSNALQRWFERN 166
Query 527 QFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTG--AYVGAL 584
G Y E I F V L P++LGG I V+ + QT T +T A +
Sbjct 167 ARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQANMAGH 226
Query 585 GSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEF 644
G AG+ F + + +E ++G+M + P Y +PK + +D + PEF
Sbjct 227 GISAGVNHGF-------TRYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEF 279
Query 645 DHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMYR 704
H+G Q I EL ++ N FGY + EY + HG F ++ + + R
Sbjct 280 AHLGEQEIKNEELYLNESDAANEG---TFGYTPRYAEYKYSQNEVHGDFRGNMAFWHLNR 336
Query 705 SFVDVPELGKDFTTMKPGDVNNVFSVTEVG-DKILGQIHFDCTAQLPISRVVVPRL 759
F + P L F P N VF+ E DK QI+ D A + + P L
Sbjct 337 IFKEKPNLNTTFVECNPS--NRVFATAETSDDKYWVQIYQDIKALRLMPKYGTPML 390
>gi|649555287|gb|KDS61824.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649560568|gb|KDS66876.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649561020|gb|KDS67307.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 4]
gi|649562724|gb|KDS68908.1| capsid family protein [Parabacteroides distasonis str. 3999B
T(B) 6]
Length=541
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 171/416 (41%), Gaps = 44/416 (11%)
Query 359 AIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYAN- 417
K+SA PFRAY +YN Y R+ T IT D+G SL+ +
Sbjct 155 GFKVSALPFRAYHLIYNEYYRDQ---------NLTSELEITLDSGNYQLPVNSSLWQLHR 205
Query 418 --WQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVVNTAIVDEDGNAFKVDFE 475
W+ D +TSAL Q+G P V T IN G + + F
Sbjct 206 RAWEKDYFTSALPWVQRG--PEV------TVPINGGGEIPVEMKEGFAAQKITTFPDRKP 257
Query 476 SNGEALKGVNYTPLKAGE--ALNMQSLVSPVT-------SGISINDFRNVNAYQRYLELN 526
+G + + L G+ ++ Q+L+ P G++IND R NA QR+ E N
Sbjct 258 ISGSEVLYSAPSVLSYGQIGSIKGQALIEPDNFVVNTDQMGVNINDIRTSNALQRWFERN 317
Query 527 QFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTG--AYVGAL 584
G Y E I F V L P++LGG I V+ + QT T +T A +
Sbjct 318 ARSGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQANMAGH 377
Query 585 GSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEF 644
G AG+ F + + +E ++G+M + P Y +PK + +D + PEF
Sbjct 378 GISAGVNHGF-------TRYFEEHGYIMGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEF 430
Query 645 DHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMYR 704
H+G Q I EL ++ N FGY + EY + HG F ++ + + R
Sbjct 431 AHLGEQEIKNEELYLNESDAAN---EGTFGYTPRYAEYKYSQNEVHGDFRGNMAFWHLNR 487
Query 705 SFVDVPELGKDFTTMKPGDVNNVFSVTEVG-DKILGQIHFDCTAQLPISRVVVPRL 759
F + P L F P N VF+ E DK QI+ D A + + P L
Sbjct 488 IFKEKPNLNTTFVECNPS--NRVFATAETSDDKYWVQIYQDIKALRLMPKYGTPML 541
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query 1 MASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
MA++FN + + +RN F+ S++N T + G + P+ + V P R+ E +R
Sbjct 1 MANIFNSVKLKR--PRRNVFNLSYENKLTVNAGELIPIMCKPVVPGDKFRVNTEMLVRLA 58
Query 61 PMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISS--DNTEEYEPPYMNF--SVNDYNEGG 116
P++ P+ ++ + ++ VP R +W + DFI+ D T+ P +F +V+ N
Sbjct 59 PLVAPMMHRVDVFTHYFFVPNRLIWNKWEDFITKGVDGTDSPVFPTYSFPSTVDTANAHN 118
Query 117 ALSPSGLGDYFGIPTNQQV 135
+ L DY G+P+ Q+
Sbjct 119 SFGDGSLWDYLGLPSINQI 137
>gi|530695351|gb|AGT39907.1| major capsid protein [Marine gokushovirus]
Length=539
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/403 (28%), Positives = 165/403 (41%), Gaps = 32/403 (8%)
Query 368 RAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYANWQSDAYTSAL 427
RAY ++N + R+ + + + + G D+ T +L + D +TSAL
Sbjct 154 RAYNLIWNEWFRD----------ENLQDSVVVDKGDGPDTYTDYTLLRRGKRHDYFTSAL 203
Query 428 TAPQQGIAPLVGLTTYETKSINEAGHEVTV--VNTAIVDEDGNAFKVDFESNGEALKGVN 485
PQ+G A + L N+ G + V+T V + V E+NG
Sbjct 204 PWPQKGDAVTLPLGGSANVVYNDTGDPAYIREVSTGNVWTTPSRESVSKEANGNMSVPTG 263
Query 486 YTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNV 545
+ ++ + +S T+ +IN R QR LE + G Y EI+ F V
Sbjct 264 SVNAQYDPNGSLVADLSTATAA-TINAIRQSFQIQRLLERDARGGTRYTEIVRSHFGVIS 322
Query 546 RYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGALGSQAGLATCFGNTDGSISVFC 605
+ PEYLGG + I+VNP+ Q + +G LG+ + T + G S F
Sbjct 323 PDARMQRPEYLGGGSAPIIVNPVAQQSASGASGTDT-PLGTLGAVGTGLASGHGFASSFT 381
Query 606 DEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAAVQARQF 665
E +V+G+ V Y L + + R D F P F H+G QPI +EL A
Sbjct 382 -EHGVVVGLCSVRADLTYQQGLHRMFSRSTRYDFFFPVFSHLGEQPILNKELYATGTSTD 440
Query 666 NVDPMTVFGYQRPWYEYVQKPDRAHGLFLS----SLRNFIMYRSFVDVPELGKDFTTMKP 721
+ VFGYQ W EY KP + GL S +L + + ++F +P L F
Sbjct 441 D----DVFGYQEAWAEYRYKPSQVTGLMRSTAAGTLDAWHLAQNFGSLPTLNSTFIE--- 493
Query 722 GDVNNVFSVTEVGDKILGQ-----IHFDCTAQLPISRVVVPRL 759
D V V VG + GQ FD P+ VP L
Sbjct 494 -DTPPVDRVVAVGSEANGQQFIFDAFFDINMARPMPMYSVPGL 535
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (44%), Gaps = 11/131 (8%)
Query 12 KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMK 71
+ ++ R+ FD D G + P+ + V P S+ ++ R +FP+ M
Sbjct 18 RAEIPRSKFDAQKTLKTAFDSGYLVPILVDEVLPGDSMNLRMTAFTRLATPLFPVMDNMY 77
Query 72 AYLSFYKVPLRTLWKDYMDFISS-----DNTEEYEPPYMNFSVNDYNEGGALSPSGLGDY 126
F+ VP R LW ++ F+ D++ +Y P M + G + + L DY
Sbjct 78 LDTFFFFVPNRLLWSNWQRFMGERDPDPDSSIDYTIPTMT------SPNGGYAVNSLQDY 131
Query 127 FGIPTNQQVSS 137
G+PT QV +
Sbjct 132 MGLPTAGQVDA 142
>gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis]
gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis
CL09T03C24]
Length=538
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 174/414 (42%), Gaps = 48/414 (12%)
Query 361 KISAYPFRAYEAVYNAYIRN---TRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYAN 417
++SA PFRAY+ +YN Y R+ T+ F LN + AD +T
Sbjct 158 QVSALPFRAYQLIYNEYYRDQNLTKPIEFSLNSGIVLS---------ADEVTRLLTLRRR 208
Query 418 -WQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVVNTAIVDEDGNAFKVDFES 476
W+ D +TSAL Q+G P V T I +G + V T D + +++ S
Sbjct 209 TWEKDYFTSALPWVQRG--PEV------TVPIQGSGGNLDV--TLKNDAHADTYRMPGTS 258
Query 477 N--GEALKGVNYTPLKAG------EALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQF 528
N A++ V + G E N Q V + G+SIND R NA QR+ E N
Sbjct 259 NRPAGAMQLVGGALIAGGTDGAYLEPDNFQVNVDEL--GVSINDLRTSNALQRWFERNAR 316
Query 529 RGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTG--AYVGALGS 586
G Y E I F V L P++LGG I V+ + QT T +T A + G
Sbjct 317 SGSRYIEQILSHFGVRSSDARLQRPQFLGGGRTPISVSEVLQTSATDSTSPQANMAGHGI 376
Query 587 QAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDH 646
AG+ F + +E +IG+M + P Y +PK + +D + PEF H
Sbjct 377 SAGVNHGFKR-------YFEEHGYIIGIMSIRPRTGYQQGVPKDFRKFDNMDFYFPEFAH 429
Query 647 IGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMYRSF 706
+G Q I E+ Q N FGY + EY + HG F ++ + + R F
Sbjct 430 LGEQEIKNEEVYLQQTPASN---NGTFGYTPRYAEYKYSMNEVHGDFRGNMAFWHLNRIF 486
Query 707 VDVPELGKDFTTMKPGDVNNVFSVTEVG-DKILGQIHFDCTAQLPISRVVVPRL 759
+ P L F P N VF+ E DK Q++ D A + + P L
Sbjct 487 SESPNLNTTFVECNPS--NRVFATAETSDDKYWIQLYQDVKALRLMPKYGTPML 538
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query 1 MASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
MA++FN + + +RN F+ S++N T + G + P+ + V P R+ E +R
Sbjct 1 MANIFNSVKLKR--PRRNVFNLSYENKLTANAGELVPIMCKPVVPGDKFRVNTEMLVRLA 58
Query 61 PMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISS--DNTEEYEPPYMNFS---VNDYNEG 115
P++ P+ ++ + ++ VP R LW + DFI+ D T+ P + VN +
Sbjct 59 PLVAPMMHRVDVFTHYFFVPNRLLWNQWEDFITKGVDGTDTPVFPKIALRPDWVNPTSAA 118
Query 116 GALSPSGLGDYFGIPT 131
L L DY G+PT
Sbjct 119 VLLDDGSLWDYLGLPT 134
>gi|575094431|emb|CDL65804.1| unnamed protein product [uncultured bacterium]
Length=560
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 179/460 (39%), Gaps = 74/460 (16%)
Query 336 DFSVTNYYAGVTPYYGVGSTDHKAI-------KISAYPFRAYEAVYNAYIRNTR-NNPFI 387
D+SV A + + DH I ++A PFRAY +YN + RN NP
Sbjct 107 DYSVPQVTAPAGGWEELSLADHMGIPTKVDNISVNALPFRAYGLIYNEFFRNQNLTNPTQ 166
Query 388 LN-------GKKTYNRFITNDAG--GADSLTPKSLFYANWQSDAYTSALTAPQQG----- 433
+ GK + +ND GA L F D +T AL PQ+G
Sbjct 167 VEVTDANIAGKNPNDVKNSNDWAITGAKCLKSAKFF------DYFTGALPQPQKGEPVEI 220
Query 434 --------------IAPLVGLTTYET---KSINEAGHEVTVVNTAIVDEDG----NAFKV 472
PL ++ +T +S + G+ +V ++G N K
Sbjct 221 NLASSWLPVGIGDYHGPLDKVSNSDTLTWESPSSEGNTKRTYALGMVQQEGEVNPNGLK- 279
Query 473 DFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFS 532
N E G +++ A A SPVT+ ++N R Q+ LE + G
Sbjct 280 ----NFETKAGGSFSESGAVAAYPTNLWASPVTAAATVNQLRQAFQVQKLLEKDARGGTR 335
Query 533 YKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGALGSQAGLAT 592
Y+EI++ F V + +PEYLGG I V+ + QT +++ S G
Sbjct 336 YREILKNHFGVTTSDARMQIPEYLGGCKVPINVSQVVQTSASTD--------ASPQGNTA 387
Query 593 CFGNTDGSISVFC---DEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHIGY 649
T S S+F DE +IGV Y + + + ++RLD + P +IG
Sbjct 388 AISVTPFSKSMFTKSFDEHGFIIGVATARTAQSYQQGIERMWSRKDRLDYYFPVLANIGE 447
Query 650 QPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLS----SLRNFIMYRS 705
Q I +E+ A Q N FGYQ W +Y KP+ G F S SL + +
Sbjct 448 QAILNKEIYA----QGNAKDDEAFGYQEAWADYRYKPNTICGRFRSNAQQSLDAWHYGQD 503
Query 706 FVDVPELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDC 745
+ +P L D+ ++ +V D + F+C
Sbjct 504 YDKLPTLSTDWMEQSDIEMKRTLAVQTEPD-FIANFRFNC 542
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (4%)
Query 15 VKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMKAYL 74
+ R+ F+ + D T D G I P++ + V P + + +R +FP+ +
Sbjct 17 LSRSRFNRTSDRLDTFDTGEIVPIYVDEVLPGDTFELDMTAIIRGSTPIFPVMDNSFLDV 76
Query 75 SFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNE-GGALSPSGLGDYFGIPT-- 131
F+ VP R W+ + + + + T + P +++SV G L D+ GIPT
Sbjct 77 YFFFVPNRLTWEHWRELMGENRTTAWTQP-VDYSVPQVTAPAGGWEELSLADHMGIPTKV 135
Query 132 -NQQVSSTPIGDFAVQFSQ 149
N V++ P + + +++
Sbjct 136 DNISVNALPFRAYGLIYNE 154
>gi|575096093|emb|CDL66973.1| unnamed protein product [uncultured bacterium]
Length=574
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 192/457 (42%), Gaps = 54/457 (12%)
Query 332 VGFDDFSVTNYYAGVTPYYGVGSTDH--------KAIKISAYPFRAYEAVYNAYIRNTRN 383
V +D+ S + + + Y+G+ S + + + +SA PFRAY ++N + R+
Sbjct 125 VRYDNLSKSTFIGTLVDYFGISSANFGSDKSGVTELVSVSALPFRAYWLIWNEWFRDENL 184
Query 384 NPFILNGKKTYNRFITNDAGGADSL--------------TPKSLFYANWQSDAYTSALTA 429
+ N + N G ++ P+ Y D +TS L
Sbjct 185 QSSVKVSMGDTNSAVDNMGSGTGNVNYSFPSGVTSYYHCAPRGKRY-----DYFTSCLPW 239
Query 430 PQQGIAPLVGLTTYETKSINEAGH-EVTVVNTAIVDEDGNAFKVDFESNGEALKGVN--- 485
PQ+G P V L T +++ + +T+ + + G+ + + G+ L
Sbjct 240 PQKG--PGVELPLGSTANVSGQNNISLTLPSVYYNGDTGSGYSNLGQMVGKQLSSARQET 297
Query 486 YTPLKAGEALNMQSLVSPVT------SGISINDFRNVNAYQRYLELNQFRGFSYKEIIEG 539
Y+ +K L + +S ++ + I+IN R QRY E++ G Y E ++
Sbjct 298 YSYIKPAGNLTLNGSMSGLSVDLSSATSITINSLRQAFMLQRYYEVDARGGTRYTEKLQA 357
Query 540 RFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGALGSQAGLATCFGNTDG 599
F V L PEYLGG + +NP+ QT T++ + G+ A G T
Sbjct 358 HFGVTNPDSRLQRPEYLGGRSSMFNINPVAQTSSTND----ISPQGNMAAYG-IHGRTYR 412
Query 600 SISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAA 659
+ + E +VIG+ V Y + ++ LD + PEF H+G Q + +E+
Sbjct 413 AFNKSFTEFGVVIGLCSVRADLTYQQGTERMWFRKDDLDFYWPEFAHLGEQAVLNQEI-Y 471
Query 660 VQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFI----MYRSFVDVPELGKD 715
VQ + VFGYQ + EY KP++ G F S+ + + + + F +P+LG
Sbjct 472 VQGTSADTG---VFGYQERYAEYRYKPNKITGQFRSTYKQTLDVWHLAQKFDSLPKLGDQ 528
Query 716 FTTMKPGDVNNVFSVTEVGDKILG-QIHFDCTAQLPI 751
F P V+ V +V +L + H C LP+
Sbjct 529 FIQDHP-PVSRVVAVPSYPHFLLDVKFHLQCVRPLPL 564
Score = 40.0 bits (92), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/118 (24%), Positives = 48/118 (41%), Gaps = 0/118 (0%)
Query 12 KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMK 71
+ D++R+ FD S T D G++ P F + V P + ++ R + P +
Sbjct 28 QADIRRSRFDRSFVYKTTFDEGKLIPYFVDEVLPGDTFKLSVTEFCRLATPICPFMDNLH 87
Query 72 AYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSGLGDYFGI 129
F+ VP R +W +++ + E + V N + L DYFGI
Sbjct 88 FDTHFFFVPYRLVWDNFVRMCGEQDNPEDSTDFSIPQVRYDNLSKSTFIGTLVDYFGI 145
Lambda K H a alpha
0.319 0.136 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5990201390484