bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-19_CDS_annotation_glimmer3.pl_2_3

Length=73
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|671511687|ref|WP_031497761.1|  hypothetical protein                35.0    1.5


>gi|671511687|ref|WP_031497761.1| hypothetical protein [Bryobacter aggregatus]
Length=148

 Score = 35.0 bits (79),  Expect = 1.5, Method: Compositional matrix adjust.
 Identities = 14/43 (33%), Positives = 24/43 (56%), Gaps = 0/43 (0%)

Query  8   VRDQTEKDLRLEADNLYRKIETQYKLIKKISDKEEAHKIIDRI  50
           VR+Q E +  L  D LYR +E+ Y+++ ++ D+       D I
Sbjct  50  VRNQLESNATLNVDALYRSLESDYRVVTQLLDQAPGGSFEDNI  92



Lambda      K        H        a         alpha
   0.317    0.133    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 430018305192