bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters



Query= Contig-19_CDS_annotation_glimmer3.pl_2_1

Length=60
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|502481171|ref|WP_012802245.1|  succinyl-CoA synthetase subunit...  33.1    9.2


>gi|502481171|ref|WP_012802245.1| succinyl-CoA synthetase subunit alpha [Kytococcus sedentarius]
 gi|256824635|ref|YP_003148595.1| succinyl-CoA synthetase subunit alpha [Kytococcus sedentarius 
DSM 20547]
 gi|256688028|gb|ACV05830.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Kytococcus 
sedentarius DSM 20547]
Length=297

 Score = 33.1 bits (74),  Expect = 9.2, Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)

Query  3    HTYELRKLENDDSVTTVLVLNEEPKDAKRKAADYANQH  40
            H   L   +NDD    ++++ E   DA+ +AADY  +H
Sbjct  192  HIDALEAFQNDDETDAIVMIGEIGGDAEERAADYIKEH  229



Lambda      K        H        a         alpha
   0.310    0.128    0.347    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 430540141590