bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 49,011,213 sequences; 17,563,301,199 total letters Query= Contig-17_CDS_annotation_glimmer3.pl_2_4 Length=635 Score E Sequences producing significant alignments: (Bits) Value gi|492501782|ref|WP_005867318.1| hypothetical protein 79.3 3e-12 gi|649557305|gb|KDS63784.1| capsid family protein 74.7 1e-11 gi|547920049|ref|WP_022322420.1| capsid protein VP1 76.3 3e-11 gi|649569140|gb|KDS75238.1| capsid family protein 74.7 5e-11 gi|649555287|gb|KDS61824.1| capsid family protein 74.3 1e-10 gi|609718276|emb|CDN73650.1| conserved hypothetical protein 72.8 3e-10 gi|547312923|ref|WP_022044635.1| putative uncharacterized protein 70.9 5e-10 gi|639237429|ref|WP_024568106.1| hypothetical protein 69.3 4e-09 gi|444297909|dbj|GAC77759.1| major capsid protein 57.8 6e-06 gi|599088027|gb|AHN52939.1| major capsid protein 57.0 7e-06 >gi|492501782|ref|WP_005867318.1| hypothetical protein [Parabacteroides distasonis] gi|409230408|gb|EKN23272.1| hypothetical protein HMPREF1059_03257 [Parabacteroides distasonis CL09T03C24] Length=538 Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 22/266 (8%) Query 376 IDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGG 432 ++V ++++ L + + R A SG Y + I + V ++D R + P + GG Sbjct 289 VNVDELGVSINDLRTSNALQRWFERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGG 346 Query 433 FSSEIIFQEVISNSATEN-EPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRID 491 + I EV+ SAT++ P +AG G + G+ G K +E YIIGI+SI PR Sbjct 347 GRTPISVSEVLQTSATDSTSPQANMAGHGISAGVNHG-FKRYFEEHGYIIGIMSIRPRTG 405 Query 492 YSQGNRFDVDLDTLD--DLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPA 549 Y QG D D D + P +G Q++ ++ + +G + G P Sbjct 406 YQQG--VPKDFRKFDNMDFYFPEFAHLGEQEIKNEEVYLQQTPASNNG-----TFGYTPR 458 Query 550 WLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLN 609 + +Y + N+V G+F + + F LNR + N + TT+++ N VFA + Sbjct 459 YAEYKYSMNEVHGDF--RGNMAFWHLNRIFSESPNLN----TTFVECNPSNRVFATAETS 512 Query 610 AMNFWVQLGIGAKVRRKMSAKVIPNL 635 +W+QL K R M P L Sbjct 513 DDKYWIQLYQDVKALRLMPKYGTPML 538 Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 41/75 (55%), Gaps = 0/75 (0%) Query 21 TVSMRKYQRSTHDLSYAWRNTQTVGTLVPFMCEVGLPGDTWELHTEASVLTHPTVGPLFG 80 +V +++ +R+ +LSY + T G LVP MC+ +PGD + ++TE V P V P+ Sbjct 7 SVKLKRPRRNVFNLSYENKLTANAGELVPIMCKPVVPGDKFRVNTEMLVRLAPLVAPMMH 66 Query 81 SFKLQGEYYVCPIRL 95 + Y+ P RL Sbjct 67 RVDVFTHYFFVPNRL 81 >gi|649557305|gb|KDS63784.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 4] gi|649559156|gb|KDS65543.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 6] Length=245 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%) Query 398 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 453 R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P Sbjct 18 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 75 Query 454 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 511 +AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P Sbjct 76 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 132 Query 512 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 571 +G Q++ ++ + +G + G P + +Y + N+V G+F + + Sbjct 133 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 185 Query 572 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 631 F LNR ++ N + TT+++ N VFA + +WVQ+ K R M Sbjct 186 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 241 Query 632 IPNL 635 P L Sbjct 242 TPML 245 >gi|547920049|ref|WP_022322420.1| capsid protein VP1 [Parabacteroides merdae CAG:48] gi|524592961|emb|CDD13573.1| capsid protein VP1 [Parabacteroides merdae CAG:48] Length=553 Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/269 (27%), Positives = 117/269 (43%), Gaps = 18/269 (7%) Query 371 NEITAIDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQT---VYTNDYIERSETP 427 N ++V + ++ L + + R A G Y + I + V ++D R + P Sbjct 299 NGTLKVNVDEMGININDLRTSNALQRWFERNARGGSRYIEQILSHFGVRSSD--ARLQRP 356 Query 428 VYEGGFSSEIIFQEVISNSAT-ENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSI 486 + GG I EV+ S+T E P +AG G + G+ G K +E YIIGI+SI Sbjct 357 QFLGGGRMPISVSEVLQTSSTDETSPQANMAGHGISAGINNG-FKHYFEEHGYIIGIMSI 415 Query 487 TPRIDYSQGNRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGK 546 TPR Y QG D D + P + Q++ ++ ++ D + G Sbjct 416 TPRSGYQQGVPRDFTKFDNMDFYFPEFAHLSEQEIKNQEL-----FVSEDAAYNNGTFGY 470 Query 547 QPAWLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADT 606 P + +Y + ++ G+F + + F LNR +E N + TT+++ + N VFA + Sbjct 471 TPRYAEYKYHPSEAHGDF--RGNLSFWHLNRIFEDKPNLN----TTFVECKPSNRVFATS 524 Query 607 SLNAMNFWVQLGIGAKVRRKMSAKVIPNL 635 FWVQ+ K R M P L Sbjct 525 ETEDDKFWVQMYQDVKALRLMPKYGTPML 553 Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 0/75 (0%) Query 21 TVSMRKYQRSTHDLSYAWRNTQTVGTLVPFMCEVGLPGDTWELHTEASVLTHPTVGPLFG 80 ++ M++ +R+ +LSY + T +G LVP MC + GD + + TE+ V P V P+ Sbjct 7 SIRMKRPRRNAFNLSYESKLTLNMGELVPIMCMPVVSGDKFRVKTESLVRLAPLVAPMMH 66 Query 81 SFKLQGEYYVCPIRL 95 + Y+ P RL Sbjct 67 RVNVFTHYFFVPNRL 81 >gi|649569140|gb|KDS75238.1| capsid family protein, partial [Parabacteroides distasonis str. 3999B T(B) 6] Length=390 Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%) Query 398 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 453 R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P Sbjct 163 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 220 Query 454 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 511 +AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P Sbjct 221 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 277 Query 512 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 571 +G Q++ ++ + +G + G P + +Y + N+V G+F + + Sbjct 278 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 330 Query 572 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 631 F LNR ++ N + TT+++ N VFA + +WVQ+ K R M Sbjct 331 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 386 Query 632 IPNL 635 P L Sbjct 387 TPML 390 >gi|649555287|gb|KDS61824.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 4] gi|649560568|gb|KDS66876.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 4] gi|649561020|gb|KDS67307.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 4] gi|649562724|gb|KDS68908.1| capsid family protein [Parabacteroides distasonis str. 3999B T(B) 6] Length=541 Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%) Query 398 LNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFSSEIIFQEVISNSATEN-EPL 453 R A SG Y + I + V ++D R + P + GG + I EV+ S+T++ P Sbjct 314 FERNARSGSRYIEQILSHFGVRSSD--ARLQRPQFLGGGRTPISVSEVLQTSSTDSTSPQ 371 Query 454 GTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFDVDLDTLD--DLHKP 511 +AG G + G+ G + +E YI+GI+SI PR Y QG D D D + P Sbjct 372 ANMAGHGISAGVNHGFTRY-FEEHGYIMGIMSIRPRTGYQQG--VPKDFRKFDNMDFYFP 428 Query 512 ALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNKVFGNFAIKDSEM 571 +G Q++ ++ + +G + G P + +Y + N+V G+F + + Sbjct 429 EFAHLGEQEIKNEELYLNESDAANEG-----TFGYTPRYAEYKYSQNEVHGDF--RGNMA 481 Query 572 FMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGIGAKVRRKMSAKV 631 F LNR ++ N + TT+++ N VFA + +WVQ+ K R M Sbjct 482 FWHLNRIFKEKPNLN----TTFVECNPSNRVFATAETSDDKYWVQIYQDIKALRLMPKYG 537 Query 632 IPNL 635 P L Sbjct 538 TPML 541 Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 41/75 (55%), Gaps = 0/75 (0%) Query 21 TVSMRKYQRSTHDLSYAWRNTQTVGTLVPFMCEVGLPGDTWELHTEASVLTHPTVGPLFG 80 +V +++ +R+ +LSY + T G L+P MC+ +PGD + ++TE V P V P+ Sbjct 7 SVKLKRPRRNVFNLSYENKLTVNAGELIPIMCKPVVPGDKFRVNTEMLVRLAPLVAPMMH 66 Query 81 SFKLQGEYYVCPIRL 95 + Y+ P RL Sbjct 67 RVDVFTHYFFVPNRL 81 >gi|609718276|emb|CDN73650.1| conserved hypothetical protein [Elizabethkingia anophelis] Length=537 Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 111/249 (45%), Gaps = 14/249 (6%) Query 384 TMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVY---TNDYIERSETPVYEGGFSSEIIFQ 440 T++ L A K+ + L + A +G Y + I + + T+D R + P + GG S I+ Sbjct 290 TVNDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSD--GRLQRPEFLGGNKSPIMIS 347 Query 441 EVISNSATENE-PLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRIDYSQGNRFD 499 EV+ SAT++ P G +AG G G GG + +E Y+IG++S+ P+ YSQG Sbjct 348 EVLQQSATDSTTPQGNMAGHGIGIGKDGGFSRF-FEEHGYVIGLMSVIPKTSYSQGIPRH 406 Query 500 VDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPAWLDYMTNYNK 559 D P + IG Q + NK + D E G P + +Y + + Sbjct 407 FSKSDKFDYFWPQFEHIGEQPV-YNKEIFAKNIDAFDSEAVF---GYLPRYSEYKFSPST 462 Query 560 VFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTSLNAMNFWVQLGI 619 V G+F KD F L R ++ D+ + D + +FA + F+ L Sbjct 463 VHGDF--KDDLYFWHLGRIFDTDKPPVLNQSFIECDKNALSRIFA-VEDDTDKFYCHLYQ 519 Query 620 GAKVRRKMS 628 +RKMS Sbjct 520 KITAKRKMS 528 >gi|547312923|ref|WP_022044635.1| putative uncharacterized protein [Alistipes finegoldii CAG:68] gi|524208404|emb|CCZ76639.1| putative uncharacterized protein [Alistipes finegoldii CAG:68] Length=338 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 133/336 (40%), Gaps = 54/336 (16%) Query 344 GLALKTYQSDIFNNWINTEWLDGEGGINEITA-----IDVSSG-SLTMDTLNLAKKVYDM 397 GL Y D+F N I G EI +++S+G S+ + L L K+ + Sbjct 11 GLLSVPYSPDLFGNIIK----QGSSPAVEIEVMNALDLNISTGFSVAVPELRLRTKIQNW 66 Query 398 LNRIAVSGGTYQDWIQTVY-TNDYIERSETPVYEGGFSSEIIFQEVISNSATENEPLGTL 456 ++R+ VSGG D +T++ T P + G ++Q I+ S G+ Sbjct 67 MDRLFVSGGRVGDVFRTLWGTKSSAIYVNKPDFLG------VWQASINPSNVRAMANGSA 120 Query 457 AGRGQNTGMKGGTVKIKID------------EPSYIIGIVSITPRIDYSQGNRFDVDLDT 504 +G N G V D EP + I + P YSQG D+ + Sbjct 121 SGEDANLGQLAACVDRYCDFSGHSGIDYYAKEPGTFMLITMLVPEPAYSQGLHPDLASIS 180 Query 505 LDDLHKPALDAIGFQDLTTNKMA-----------------WWDETITAD-GEKQLKSVGK 546 D P L+ IGFQ + ++ + W+ T T + + SVG+ Sbjct 181 FGDDFNPELNGIGFQLVPRHRFSMMPRGFNFTGLDQEASPWFGHTGTGVLVDPNMVSVGE 240 Query 547 QPAWLDYMTNYNKVFGNFAIKDSEMFMTLNRN---YEMDENKSIAD----LTTYIDPEKY 599 + AW T+Y+++ G+FA + + L R Y D+ TYI+P + Sbjct 241 EVAWSWLRTDYSRLHGDFAQNGNYQYWVLTRRFTTYFPDDGTGFYQDGEYTGTYINPLDW 300 Query 600 NYVFADTSLNAMNFWVQLGIGAKVRRKMSAKVIPNL 635 YVF D +L A NF V +SA +P L Sbjct 301 QYVFVDQTLMAGNFAYYGTFDLNVTSSLSANYMPYL 336 >gi|639237429|ref|WP_024568106.1| hypothetical protein [Elizabethkingia anophelis] Length=546 Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 122/261 (47%), Gaps = 23/261 (9%) Query 376 IDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVY---TNDYIERSETPVYEGG 432 + +SGS T++ L A K+ + L + A +G Y + I + + T+D R + P + GG Sbjct 292 LKTASGS-TINDLRRAFKLQEWLEKNARAGSRYAESILSFFGVKTSD--GRLQRPEFLGG 348 Query 433 FSSEIIFQEVISNSATENE-PLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPRID 491 + I+ EV+ S+T++ P G +AG G + G +GG K +E Y+IG++S+ P+ Sbjct 349 NKTPILISEVLQQSSTDSTTPQGNMAGHGISVGKEGGFSKF-FEEHGYVIGLMSVIPKTS 407 Query 492 YSQG-NRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKS---VGKQ 547 YSQG R D D P + IG Q + +++ I A S G Sbjct 408 YSQGIPRHFSKFDKFDYFW-PQFEHIGEQPV-------YNKEIFAKNVGDYDSGGVFGYV 459 Query 548 PAWLDYMTNYNKVFGNFAIKDSEMFMTLNRNYEMDENKSIADLTTYIDPEKYNYVFADTS 607 P + +Y + + + G+F KD+ F L R ++ + ++ + +FA Sbjct 460 PRYSEYKYSPSTIHGDF--KDTLYFWHLGRIFDSSAPPKLNRDFIEVNKSGLSRIFA-VE 516 Query 608 LNAMNFWVQLGIGAKVRRKMS 628 N+ F+ L +RKMS Sbjct 517 DNSDKFYCHLYQKITAKRKMS 537 >gi|444297909|dbj|GAC77759.1| major capsid protein, partial [uncultured marine virus] Length=257 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 54/210 (26%), Positives = 95/210 (45%), Gaps = 19/210 (9%) Query 378 VSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQT---VYTNDYIERSETPVYEGGFS 434 +S LT++ L LA ++ + L A +G Y + + V ++D R + P Y GG Sbjct 38 ISDADLTVNDLRLAIRIQEWLEVNARAGSRYVEHLLAHWGVRSSD--ARLDRPEYLGGGK 95 Query 435 SEIIFQEVISNS--ATENE---PLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGIVSITPR 489 ++ EV+S + A + E P +AG G + G K + +E +I+GI+S+ PR Sbjct 96 QPVLVSEVLSTAEVAIDQEISIPQANMAGHGISVG-GSNRFKKRFEEHGHILGIMSVIPR 154 Query 490 IDYSQGNRFDVDLDTLDDLHKPALDAIGFQDLTTNKMAWWDETITADGEKQLKSVGKQPA 549 Y QG + D + P +G Q + ++ D+T D + G Q Sbjct 155 TAYQQGVDRSFSREDKFDYYFPEFAHLGEQSVNNYEVYMGDDTENHD------TFGYQSR 208 Query 550 WLDYMTNYNKVFGNFAIKDSEMFMTLNRNY 579 + +Y + V G+F +D+ F + R + Sbjct 209 YAEYKYKNSMVTGDF--RDNLDFWHMGRQF 236 >gi|599088027|gb|AHN52939.1| major capsid protein, partial [uncultured Gokushovirinae] Length=219 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 45/156 (29%), Positives = 73/156 (47%), Gaps = 3/156 (2%) Query 366 GEGGI--NEITAIDVSSGSLTMDTLNLAKKVYDMLNRIAVSGGTYQDWIQTVYTNDYIER 423 G+ G+ N++ A + + T++ L A ++ +L R A SG Y + ++ + ++++ Sbjct 57 GDAGVQANQLYADLSQATAATINQLRQAFQIQKLLERDARSGTRYAEIVKAHFGVNFMDV 116 Query 424 SETPVYEGGFSSEIIFQEVISNSATENEPLGTLAGRGQNTGMKGGTVKIKIDEPSYIIGI 483 + P + GG S+ I V S + P GTLA G T GG K E ++GI Sbjct 117 TYRPEFLGGTSTPINVTSVPQTSESGTTPQGTLAAFGTATVNGGGFTK-SFTEHCIVMGI 175 Query 484 VSITPRIDYSQGNRFDVDLDTLDDLHKPALDAIGFQ 519 S+ + Y QG T D + PAL IG Q Sbjct 176 ASVRADLTYQQGLNRMFSRSTRYDFYFPALAHIGEQ 211 Lambda K H a alpha 0.314 0.131 0.386 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 4783950328320