bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-15_CDS_annotation_glimmer3.pl_2_2

Length=142
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|490418710|ref|WP_004291033.1|  hypothetical protein                62.4    1e-09
gi|496050830|ref|WP_008775337.1|  hypothetical protein                49.7    3e-05
gi|547226429|ref|WP_021963492.1|  putative uncharacterized protein    41.6    0.029
gi|494822883|ref|WP_007558291.1|  hypothetical protein                37.7    0.67
gi|573548038|gb|ETT46886.1|  ABC transporter ATP-binding protein ...  35.4    9.7


>gi|490418710|ref|WP_004291033.1| hypothetical protein [Bacteroides eggerthii]
 gi|217986637|gb|EEC52971.1| hypothetical protein BACEGG_02722 [Bacteroides eggerthii DSM 
20697]
Length=155

 Score = 62.4 bits (150),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (55%), Gaps = 5/108 (5%)

Query  9    VLSNSEFTTVRPIDELRFVE-ELDG--SIRFVSDATLLLNEQRIINDIGEDNYRNFIRQL  65
            VLS SEF    P+ E  F E E DG  SIR  SD  +L N+QR+ + +       +   L
Sbjct  24   VLSGSEFVEPSPLHEFMFQEIECDGKKSIRITSDIYMLFNQQRL-DKLTRSQLVEYFDNL  82

Query  66   QVN-PSSPYKDAKFTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQI  112
             V+ P       K TDEQL + +KSR++Q+PSE+  W + ++  Q+ +
Sbjct  83   SVSEPKMSDLRKKMTDEQLCSFVKSRFIQTPSELMAWSQYLMSSQDAM  130


>gi|496050830|ref|WP_008775337.1| hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229448894|gb|EEO54685.1| hypothetical protein BSCG_01610 [Bacteroides sp. 2_2_4]
Length=154

 Score = 49.7 bits (117),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (6%)

Query  10   LSNSEFTTVRPIDELRFVE-ELDG--SIRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQ  66
            +  SEF    P+D+  F E  +DG  SIR  SD  +L N+QR+ + + + +   +   + 
Sbjct  24   MQCSEFREESPVDQFLFQEVSVDGDTSIRLSSDIYMLFNQQRL-DKLSQTSLLEYFNNIS  82

Query  67   VN-PSSPYKDAKFTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQ-EQIS  113
            V  P      +K  DEQL++ +KSR++QS SE+  W   +++   EQI+
Sbjct  83   VTEPRFNELRSKLGDEQLISFVKSRFIQSKSELMAWSNYLMNSTDEQIA  131


>gi|547226429|ref|WP_021963492.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
 gi|524103381|emb|CCY83992.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=152

 Score = 41.6 bits (96),  Expect = 0.029, Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (3%)

Query  33   SIRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQVNPSSPYK-DAKFTDEQLMTEIKSRY  91
            +I +V D  +L N+ R+ + +G D  + ++  L     S  K     TDEQLM   KSRY
Sbjct  49   AIAYVDDIYMLFNQNRL-DSVGRDTIQKWLDGLTPRSDSLAKLRENVTDEQLMEICKSRY  107

Query  92   VQSPSEVREW  101
            +QS SE+  W
Sbjct  108  IQSSSELLAW  117


>gi|494822883|ref|WP_007558291.1| hypothetical protein [Bacteroides plebeius]
 gi|198272098|gb|EDY96367.1| hypothetical protein BACPLE_00803 [Bacteroides plebeius DSM 17135]
Length=140

 Score = 37.7 bits (86),  Expect = 0.67, Method: Compositional matrix adjust.
 Identities = 15/26 (58%), Positives = 19/26 (73%), Gaps = 0/26 (0%)

Query  77   KFTDEQLMTEIKSRYVQSPSEVREWV  102
            K +DEQL   +KSRY+Q PSE+R W 
Sbjct  73   KMSDEQLHQFVKSRYIQHPSELRAWA  98


>gi|573548038|gb|ETT46886.1| ABC transporter ATP-binding protein (multidrug resistance protein) 
[Paenibacillus sp. FSL H8-237]
Length=617

 Score = 35.4 bits (80),  Expect = 9.7, Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (8%)

Query  2    EKRDIINVLSNSEFTTVRPIDELRFVEELDGSIRFVSDATLLLNEQRI---INDIGEDNY  58
            +K + IN++    FT ++ ID++  + E  G +  V D   L++  +I   + DI  DNY
Sbjct  545  KKTERINIIITHRFTNIKNIDQIIVIHE--GKVDAVGDHDFLISNNKIYAELYDIQADNY  602

Query  59   RNFIRQ  64
            + FI++
Sbjct  603  KGFIKE  608



Lambda      K        H        a         alpha
   0.315    0.133    0.360    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 431168549280