bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-38_CDS_annotation_glimmer3.pl_2_5
Length=125
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 117 8e-36
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 43.5 6e-08
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 42.4 1e-07
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 35.0 1e-05
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 33.5 5e-05
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 23.9 0.20
Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4 22.3 1.9
Microvirus_gi|9626342|ref|NP_040674.1|_DNA_maturation_protein_[... 20.8 3.8
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 20.0 4.5
Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 20.8 5.8
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 117 bits (294), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 51/105 (49%), Positives = 76/105 (72%), Gaps = 0/105 (0%)
Query 1 MASAVAVVIQPIESLRFYTDEDGCVHMNSDVNLLMNAERIRNQIGEENYLNIVRSIQPSR 60
+ SA+ + P+E LR+ D+DG + SDVNLLMNAER+RNQIGEE+YLN++R IQP +
Sbjct 22 LKSAIYCQVGPVEMLRYVKDDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKK 81
Query 61 SPYKQKLDDDALISTLKSRYLQSPAEIDAWMASLDQKYEDMVAEV 105
SPY K D+ L + +KSR++Q+P+E+ AW+ SL + + +E+
Sbjct 82 SPYDNKYTDEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSEL 126
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 43.5 bits (101), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (48%), Gaps = 5/86 (6%)
Query 11 PIESLRFYTDEDGCVHMNSDVNLLMNAERI--RNQIGEENYLNIVRSIQPSRSPYKQKLD 68
P+ F + DG V SD +L + I NQ+ Y+N S+ P S Y + +
Sbjct 85 PVGDFLFDHNADGSVTFCSDYGILFGQKAIDNMNQVQLRRYMN---SLVPRSSNYTRNYN 141
Query 69 DDALISTLKSRYLQSPAEIDAWMASL 94
DD L+ K R +QS E+ +W+ L
Sbjct 142 DDFLLDYCKDRNIQSATEMASWLDHL 167
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 42.4 bits (98), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/111 (32%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query 2 ASAVAVVIQPIESLRFY---TDEDGCVHMNSDVNLLMNAERIRNQIGEENYLNIVRSIQP 58
A AVA E LR TD V SD+ L+++ + + ++ G + +S Q
Sbjct 36 AFAVAPNFDSTEQLRVEIDDTDASRPVRYTSDIRLILHNKDLASRAGVDVASKFGQSKQ- 94
Query 59 SRSPYKQKLD---DDALISTLKSRYLQSPAEIDAWMASLDQKYEDMVAEVK 106
S S +Q +D D+ L++T++SRY+QSP+EI AW L E++ ++ +
Sbjct 95 SPSQIQQIMDTMSDEDLLATVRSRYIQSPSEILAWSKELSAYAENLESQAQ 145
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 35.0 bits (79), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 73 ISTLKSRYLQSPAEIDAWMASLDQK 97
+ T+KSRYLQSP+E+ AW+ +L K
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDK 25
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 33.5 bits (75), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 22/28 (79%), Gaps = 0/28 (0%)
Query 67 LDDDALISTLKSRYLQSPAEIDAWMASL 94
+ DD L++T++SR++Q+P+EI AW L
Sbjct 4 MSDDDLLATVRSRHIQAPSEIIAWSKEL 31
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 23.9 bits (50), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (38%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 73 ISTLKSRYLQSPAEIDAWMASLDQKYEDMVAE 104
+S +K R +QS AE+ AW L K +++ E
Sbjct 1 MSLIKPRNVQSHAELKAWSEFLTDKAKEIQTE 32
> Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4
Length=562
Score = 22.3 bits (46), Expect = 1.9, Method: Composition-based stats.
Identities = 10/24 (42%), Positives = 13/24 (54%), Gaps = 0/24 (0%)
Query 58 PSRSPYKQKLDDDALISTLKSRYL 81
P+R PY D D + L+S YL
Sbjct 160 PNRIPYICNRDLDLFLKRLRSYYL 183
> Microvirus_gi|9626342|ref|NP_040674.1|_DNA_maturation_protein_[Enterobacteria_phage_G4_sensu_lato]
Length=84
Score = 20.8 bits (42), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 23/48 (48%), Gaps = 2/48 (4%)
Query 44 IGEENYLNIVRSIQPSRSPYKQKL--DDDALISTLKSRYLQSPAEIDA 89
+ EE YLN++ ++ Y++ +++ LK R L S + D
Sbjct 32 LDEEKYLNMLGALLKDWFRYEEHFVHGKQSMLDILKERGLLSTSSTDT 79
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 20.0 bits (40), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 0/18 (0%)
Query 77 KSRYLQSPAEIDAWMASL 94
K R +QS E+ AW+ L
Sbjct 5 KDRNIQSYTEMQAWLEHL 22
> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565
Score = 20.8 bits (42), Expect = 5.8, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 58 PSRSPYKQKLDDDALISTLKSRY 80
P+R PY D D + L+S Y
Sbjct 160 PNRIPYICNRDLDLFLKRLRSYY 182
Lambda K H a alpha
0.314 0.129 0.355 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7492056