bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_5

Length=611
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4       1201   0.0
  Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4         275   3e-85
  Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4         269   3e-83
  Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4         145   5e-39
  Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4         142   6e-38
  Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4        135   1e-35
  Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4         130   5e-34
  Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4        124   6e-32
  Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4        122   3e-31
  Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4        116   3e-29


> Alpavirinae_Human_feces_E_011_Microviridae_AG0385_putative.VP4
Length=611

 Score =  1201 bits (3106),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 593/611 (97%), Positives = 601/611 (98%), Gaps = 0/611 (0%)

Query  1    MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHF  60
            MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCG CKSCIMNKSNFATAYAMNMATHF
Sbjct  1    MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGHCKSCIMNKSNFATAYAMNMATHF  60

Query  61   KYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSL  120
            KYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPR LTPEYYHDRD SL
Sbjct  61   KYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRFLTPEYYHDRDFSL  120

Query  121  DPAQNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANG  180
            D AQNEVEQVFD+GFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANG
Sbjct  121  DSAQNEVEQVFDVGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANG  180

Query  181  RYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGP  240
            RYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGP
Sbjct  181  RYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGP  240

Query  241  QTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPF  300
            QTYRPHWHCLLFFNSEEITQTLREDISKAW+YGRIDYSLSRGAAASYVA+YVNSAACLPF
Sbjct  241  QTYRPHWHCLLFFNSEEITQTLREDISKAWSYGRIDYSLSRGAAASYVAAYVNSAACLPF  300

Query  301  FYVGQKEIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVRS  360
             YVGQKEIRPRSFHSKGFGSNK+FPKSSDVSEISKISDLFFDGVNVDSNGKV+NIRPVRS
Sbjct  301  LYVGQKEIRPRSFHSKGFGSNKVFPKSSDVSEISKISDLFFDGVNVDSNGKVVNIRPVRS  360

Query  361  CELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPSFGSDGFRLSDLVRA  420
            CELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTP+FGSD FRLSDLVRA
Sbjct  361  CELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPNFGSDDFRLSDLVRA  420

Query  421  YSEYYERNFTDFSFSLRFLRGYRTRDYSDELIFREARLFDGYVFNKDMIFGRLYRLFAKV  480
            YSEYYERNFTDFSFSLRFLRGYRTRDY+DELIFREARLFDGYVFNKDMIFGRLYRLFAKV
Sbjct  421  YSEYYERNFTDFSFSLRFLRGYRTRDYADELIFREARLFDGYVFNKDMIFGRLYRLFAKV  480

Query  481  LRCFRFWNLKQYTDSWSLKAAVKKIWSYGWEYWKKKEYRFLTTYFEYLEGCNDDERLFLL  540
            LRCFRFWNLKQYTDSWSLK A+KKIWSYGWEYWKKKEYRFLTTYFEYLEGCNDDERLFLL
Sbjct  481  LRCFRFWNLKQYTDSWSLKVAIKKIWSYGWEYWKKKEYRFLTTYFEYLEGCNDDERLFLL  540

Query  541  VRTSGSGLATDSPHSWTYTQREDYVNCLPDDLYKRYMKTLKWLTARTEKVLKDKVKHKEF  600
            VRTSGSGLATDSPHSWTYTQREDYVNCL DD YKRYM TLKWLTARTEKVLKDKVKHKEF
Sbjct  541  VRTSGSGLATDSPHSWTYTQREDYVNCLSDDFYKRYMNTLKWLTARTEKVLKDKVKHKEF  600

Query  601  NDMQGVLLFSD  611
            NDMQGVLLFSD
Sbjct  601  NDMQGVLLFSD  611


> Alpavirinae_Human_gut_22_017_Microviridae_AG0393_putative.VP4
Length=562

 Score =   275 bits (703),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 212/638 (33%), Positives = 299/638 (47%), Gaps = 106/638 (17%)

Query  1    MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHF  60
            MI KE  L   L T C  P+ +VN Y+H+ +   CG C SCI+ +S+  T      +  F
Sbjct  1    MITKE--LQNKLVTRCQHPRTVVNKYTHEPVVVSCGHCPSCILRRSSVQTNLLTTYSAQF  58

Query  61   KYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSL  120
            +Y YFVTLTY   FLP L V VV                  T D            D+S 
Sbjct  59   RYVYFVTLTYAPSFLPTLEVSVVE---------------TCTDD----------IADVSC  93

Query  121  DPAQNEVE----QVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILI  176
             P  +E++      +  GF+S+PR  SVK K S   R+F D  +KF  PMK  EL  IL 
Sbjct  94   VPNIDELDASDPNTYLFGFRSVPRSSSVKLKSSTVERTFKDPDVKFSYPMKPKELLSILG  153

Query  177  KANGRYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVS  236
            K N                +   +IP + +RD++LF KRLR       +   K+ YY VS
Sbjct  154  KINH---------------NVPNRIPYICNRDLDLFLKRLR-----SYYLDEKLRYYAVS  193

Query  237  EYGPQTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaa  296
            EYGP ++RPHWH LLF NSE  ++T+ E++SKAW+YGR D SLSRG AA YVASYVNS  
Sbjct  194  EYGPTSFRPHWHLLLFSNSERFSRTVCENVSKAWSYGRCDASLSRGFAAPYVASYVNSFV  253

Query  297  CLPFFYVGQ-KEIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINI  355
             LP FY    K +RP+SFHS GF  + +FP+   V+E+ +I+D   +GV V+ +G    I
Sbjct  254  ALPDFYTQMPKVVRPKSFHSIGFTESNLFPRKVRVAEVDEITDKCLNGVRVERDGYFRTI  313

Query  356  RPVRSCELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPSFG-SDGFRL  414
            +P     L +FPRFS+       +  +L  +    PER++  G   I    FG S    +
Sbjct  314  KPTWPYLLRLFPRFSDAIRKSPSSIYQLLFAAFTAPERVIRSGCADIGCDPFGESSKQSI  373

Query  415  SDLVRAYSEYYERNFTDFSFSLRFLRGYRTRDYSDELIFREARLFDGYVFNKDMIFGRLY  474
                + Y  Y + N+   +    FL    +  +SD LI  E RL+DG          R+Y
Sbjct  374  LSFCKQYLNYVD-NYGKSNEHRNFLSPQASLPHSDVLILSECRLYDGVDLETTHRVSRVY  432

Query  475  RLFAKVLRCFRFWNLKQYTDSWSLKAAVKKIWSYGW--------------------EYWK  514
            R          F  + ++  ++S     +  WS G                      +W 
Sbjct  433  RF---------FLGISKFIRTYSTDGCSELFWSSGTPGGDLFCRERFLRIISEKIVNFWN  483

Query  515  KKEYRFLTTYFEYLEGCNDDERLFLLVRTSGSGLATDSPHSWTYTQ----REDYVNCLPD  570
            + EY  L  +++ LE  ND E +   +R           +S+ Y +     E   N LP 
Sbjct  484  RYEYNRLVDFYQTLEDSNDKELVDFELRN----------YSFRYNRSVRDNERPYNELP-  532

Query  571  DLYKRYMKTLKWLTARTEKVLKDKVKHKEFNDMQGVLL  608
                     ++ L A +    +DKVKHK+ ND+ G+ L
Sbjct  533  --------LVRRLAAASLMKCRDKVKHKKVNDLSGIFL  562


> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565

 Score =   269 bits (688),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 206/628 (33%), Positives = 299/628 (48%), Gaps = 80/628 (13%)

Query  1    MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHF  60
            MI KE  L   L T C  P+ +VN Y+H+ +   CG C SC++ +S   T      +  F
Sbjct  1    MITKE--LQNKLVTRCQNPRTVVNKYTHEPVVVSCGACPSCVLRRSGIQTNLLTTYSAQF  58

Query  61   KYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSL  120
            +Y YFVTLTY   FLP L V V+          ++   + S  D               L
Sbjct  59   RYVYFVTLTYAPCFLPTLEVSVIETCT------DDIADVSSVPDIN------------DL  100

Query  121  DPAQNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANG  180
            DP  N     +  GF S+PR  SVK K S   R+F D  ++F  PMK  EL  IL K N 
Sbjct  101  DPCDN---NRYLFGFCSVPRSASVKLKNSTVERTFKDPEVRFSYPMKPKELLSILDKINH  157

Query  181  RYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGP  240
                           +   +IP + +RD++LF KRLR       +   K+ YY VSEYGP
Sbjct  158  ---------------NVPNRIPYICNRDLDLFLKRLR-----SYYPYEKLRYYAVSEYGP  197

Query  241  QTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPF  300
             +YRPHWH LLF NSE+ ++T+ E++SKAW+YGR D SLSRG AA YVASYVNS   LP 
Sbjct  198  TSYRPHWHLLLFSNSEQFSKTILENVSKAWSYGRCDASLSRGFAAPYVASYVNSFVALPS  257

Query  301  FYVGQKE-IRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVR  359
            FY      +RP+SFHS GF  + +FP+   +SEI +++D   +GV V+ +G    ++P  
Sbjct  258  FYTEMPRFLRPKSFHSIGFTESNLFPRKVRISEIDEVTDKCLNGVRVERDGYFRILKPSW  317

Query  360  SCELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPSFGSDGFR-LSDLV  418
               L +FPRFS+       +  +L  +    P R++  G   I    F  +  + L    
Sbjct  318  PYLLRLFPRFSDAIRKSPSSIYQLLFAAFTAPARVIRSGCADIGCDPFVENSKQSLLSFC  377

Query  419  RAYSEYYERNFTDFSFSLRFLRGYRTRDYSDELIFREARLFDGYVFNKDMIFGRLYRLFA  478
            + Y  Y + +     F   FL  +    +SD LI  E RL+DG          R+YR F 
Sbjct  378  KQYLNYVDNHGKSNEFK-NFLSPHADLPHSDVLILTECRLYDGVDLEAAHRLSRVYRFFL  436

Query  479  KVLRCFRFWNLKQYTDS-WSLKAAVKKIWSYGWE------------YWKKKEYRFLTTYF  525
             + +  R ++    ++  WS      ++  +G E            +W + +Y  L  ++
Sbjct  437  GIAKFIRTYSTDGCSELFWSSGTPGGEL--FGRERFLRIISEKIVVFWNRYDYMRLVDFY  494

Query  526  EYLEGCNDDERLFLLVRTSGSGLATDSPHSWTYTQREDYVNCLPDDLYKRY--MKTLKWL  583
            + LE  ND E +   +R           +S+ Y +          D  K Y  +  ++ L
Sbjct  495  QTLEDSNDKELVDFEIRN----------YSFCYNRSV-------RDKEKPYHELPLVRRL  537

Query  584  TARTEKVLKDKVKHKEFNDMQGVLLFSD  611
             A +    +DKVKHK+ NDM G+  + D
Sbjct  538  AAASLMKCRDKVKHKKINDMFGIFSYQD  565


> Alpavirinae_Human_feces_D_015_Microviridae_AG020_putative.VP4
Length=563

 Score =   145 bits (366),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 119/384 (31%), Positives = 185/384 (48%), Gaps = 45/384 (12%)

Query  13   FTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYCYFVTLTYKD  72
            F  C  PQ I N Y+ D +   CG+C  C++ K++ +T     +  + +YCYFVTLTY  
Sbjct  9    FNRCEHPQVIQNKYTGDYVKVDCGQCPYCLIKKADRSTQKCDFVKYNHRYCYFVTLTYNT  68

Query  73   IFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLT--------PEYY-----------  113
             ++P +S+  +    + +L     ++  +    R+LT        P++            
Sbjct  69   QYVPKMSLTQIEDYLSEWLPVRPPKSFGTQLTARMLTDSRVNKKIPDFMSAEVNRPYMLE  128

Query  114  HDRDLSLDPAQ-------NEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPM  166
            H R L  D  +       N + +      +SIPR VS       + ++F DE  +  + M
Sbjct  129  HLRLLEADRYKALALRYPNFISKARPYILRSIPR-VS-------KLQNFKDEYFEELVWM  180

Query  167  KLTELQDILIKANGRYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFT  226
             L E+ + L K N     G       +    K  +  +  RD +LF KRLR+ L      
Sbjct  181  -LPEIAESLKKKNNTDANG-------AFPQFKGLLKYVNIRDYQLFAKRLRKYLSKKVGK  232

Query  227  SSKICYYVVSEYGPQTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaas  286
              KI  YVVSEY P+T+RPH+H L FF+S+EI +  R+ + ++W  GR+D  L+R  A S
Sbjct  233  YEKIHSYVVSEYSPKTFRPHFHILFFFDSDEIAKNFRQAVYQSWRLGRVDTQLAREQANS  292

Query  287  yvasyvnsaaCLPFFYVGQKEIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNV  346
            YV++Y+NS   +PF Y  +K IRPRS  S  FG  ++      + +        FDG++ 
Sbjct  293  YVSNYLNSVVSIPFVYKAKKSIRPRSRFSNLFGFEEV---KEGIRKAQDKRAALFDGLSY  349

Query  347  DSNGKVINIRPVRSCELAVFPRFS  370
             SN K +   P  S    +FPRF+
Sbjct  350  ISNQKFVRYVPSGSLIDRLFPRFT  373


 Score = 23.1 bits (48),  Expect = 8.1, Method: Compositional matrix adjust.
 Identities = 12/30 (40%), Positives = 14/30 (47%), Gaps = 0/30 (0%)

Query  579  TLKWLTARTEKVLKDKVKHKEFNDMQGVLL  608
            T KW      +V   +VKHK  ND   V L
Sbjct  534  TEKWHDTNYHEVHYFRVKHKVLNDQNDVFL  563


> Alpavirinae_Human_feces_B_039_Microviridae_AG093_putative.VP4
Length=559

 Score =   142 bits (357),  Expect = 6e-38, Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 253/616 (41%), Gaps = 96/616 (16%)

Query  15   ECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYCYFVTLTYKDIF  74
             C     I N Y+   I   CG+C  CI  ++  A+       + FKY YFVTLTY +  
Sbjct  13   HCQHRSFITNRYNGARITVDCGQCDYCIHKRAQKASMRVKTAGSAFKYSYFVTLTYDNEH  72

Query  75   LPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPAQNEVEQVFDIG  134
            +P ++ +V+            +E +V  S       EY+    +S +   ++   +  I 
Sbjct  73   IPLMNCKVLH---------SEYEDVVGISGDIHFGDEYHKYIPVS-EYRCDDNSMLRHIF  122

Query  135  FQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMK------LTELQDILIKANGRYDYGKKK  188
            F+ +        +G+  F    D  +K  +P+K      +  ++  + K          K
Sbjct  123  FEQV--------QGTVPF----DREIKEYVPVKDNWFLSMAAIRSFIYKTQS-----VDK  165

Query  189  VVYPSLADCKLQ--IPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTYRPH  246
              YP+         IP L   D++ + KRLR+ L           +Y V EYGP  +RPH
Sbjct  166  TDYPASEQYGRDNLIPFLNYVDVQNYIKRLRKYLFQQLGKYETFHFYAVGEYGPVHFRPH  225

Query  247  WHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPFFYVGQK  306
            +H LLF NS+++++ LR    K+W  GR D+  S G A SYVASYVNS    P  Y   +
Sbjct  226  YHLLLFTNSDKVSEVLRYCHDKSWKLGRSDFQRSAGGAGSYVASYVNSLCSAPLLYRSCR  285

Query  307  EIRPRSFHSKGFGSNKIFPKSSDV-------SEISKISDLFFDGVNVDSNGKVINIRPVR  359
              RP+S  S GF     F K  D        ++I +  D   +G   + NG  +   P  
Sbjct  286  AFRPKSRASVGF-----FEKGCDFVEDDDPYAQIEQKIDSVVNGRVYNFNGVSVRSTPPL  340

Query  360  SCELAVFPRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYLGIDTPSFGSDGFRLSDLVR  419
            S    + PRFS+    D     ++  +V  TP+R+   G+      S  S       LVR
Sbjct  341  SYIRTLLPRFSSARNDDGIAIARILYAVHSTPKRIARFGFADYKQDSILS-------LVR  393

Query  420  AYSEYYERN--FTDFSFSLRFLRGYRTRDYSDELIFREARLFDGYV-----FNKDMIFGR  472
             Y +Y + N   TD                 D+LI   +R    +V      + +    +
Sbjct  394  TYYQYLKVNPILTD----------------DDKLILHASRCLTRFVNCSSDVDIESYINK  437

Query  473  LYRLFAKVLRCFRFWNLKQY-TDSWSLKAAVKKIWSYGWEYWKKKEYRFLTTYFEYLEGC  531
            LYRLF  V + FR W+L  + +D  +    +  I   G EY KKK+Y  L   F      
Sbjct  438  LYRLFLYVYKFFRNWHLPFFGSDISAFSGRIMFIIKTGIEYEKKKDYESLRDVFN-----  492

Query  532  NDDERLFLLVRTSGSGLATDSPHSWTYTQREDYVNCLPDDLYKRYMKTLKWLTARTEKVL  591
                     +R++   ++          Q  D ++    D+    ++ L+ L  R+    
Sbjct  493  ---------IRSANPNISDCMFALPANGQERDVLS----DVSCETVQLLEQLRLRSATFC  539

Query  592  KDKVKHKEFNDMQGVL  607
            +D +KHK  ND   + 
Sbjct  540  RDMIKHKRLNDANNIF  555


> Alpavirinae_Human_feces_A_034_Microviridae_AG0102_putative.VP4
Length=539

 Score =   135 bits (339),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 180/394 (46%), Gaps = 57/394 (14%)

Query  13   FTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYCYFVTLTYKD  72
            +  CL P+ I N Y+ D I+ PCG C+ C+ NK+  A           +YC F+TLTY  
Sbjct  9    YGSCLHPRVIKNKYTGDPIYVPCGTCEFCVHNKAIKAELKCNVQLASSRYCEFITLTYST  68

Query  73   IFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPAQNEVEQVFD  132
             +LP          G  Y              PR                         +
Sbjct  69   EYLPV---------GKFY------------QGPR------------------------GE  83

Query  133  IGFQSIPRDVSVKSK---GSFRFRSFDDEPLKFCIPMKLTELQDILIKANGRY-DYGKKK  188
            + F S+PRD     K   G  R  SF+D+   F   +  +  Q +  KA+  Y  +   +
Sbjct  84   VRFCSLPRDFVYSYKTVQGYTRNISFNDKTFDFDTQLSWSSAQLLQKKAHLHYTSFPDGR  143

Query  189  VVY--PSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTYRPH  246
             +Y  P +      +  L   DI+LFFKRL +N+     T+ KI YYVV EYGP T+RPH
Sbjct  144  CIYNRPYMEGL---VGYLNYHDIQLFFKRLNQNI--RRITNEKIYYYVVGEYGPTTFRPH  198

Query  247  WHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPFFYVGQK  306
            +H LLF +S ++ +++R+ +SK+W +G  D      +A+ YVA YVNS ACLP F+   +
Sbjct  199  FHILLFHDSRKLRESIRQFVSKSWRFGDSDTQPVWSSASCYVAGYVNSTACLPDFFKNSR  258

Query  307  EIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVRSCELAVF  366
             I+P    S  F  +  F +     E  +I  LF+DG  ++ NGK   +RP RS    ++
Sbjct  259  HIKPFGRFSVNFAESA-FNEVFKPEENEEIFSLFYDGRVLNLNGKPTIVRPKRSHINRLY  317

Query  367  PRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYL  400
            PR      +      ++   V   P+ +   G++
Sbjct  318  PRLDKSKHATVVDDIRIASVVSRLPQVVAKFGFI  351


> Alpavirinae_Human_gut_33_005_Microviridae_AG0180_putative.VP4
Length=536

 Score =   130 bits (326),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 172/394 (44%), Gaps = 58/394 (15%)

Query  13   FTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYCYFVTLTYKD  72
            +  CL P  I N Y+ D I+  CG C+ C+ NK+              + C+FVTLTY  
Sbjct  9    YCSCLHPVIIKNKYTGDPIYVECGTCEVCLSNKAIQKELRCNIQLASSRCCFFVTLTYAT  68

Query  73   IFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPAQNEVEQVFD  132
              +P      +  S                          YH                  
Sbjct  69   EHIPVARFYKLNDS--------------------------YH------------------  84

Query  133  IGFQSIPRD---VSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKAN---GRYDYGK  186
                 +PRD     V S+G  R  SF DE   +   ++   +  +L K +     Y  G+
Sbjct  85   --LCCVPRDHVYTYVTSQGYNRKMSFCDEEFDYPTNLRDEAVTALLDKTHLDRTVYPDGR  142

Query  187  KKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTYRPH  246
              V YP++ D    +P L  RD++LF KR+ + +    +T  KI  Y V EYGP+T+RPH
Sbjct  143  SVVKYPNMGDL---LPYLNYRDVQLFHKRINQQIKK--YTDEKIYSYTVGEYGPKTFRPH  197

Query  247  WHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPFFYVGQK  306
            +H L FF+SE + Q   + + KAW +G  D      +A+SYVA Y+NS+ CLP FY   +
Sbjct  198  FHLLFFFDSERLAQVFGQLVDKAWRFGNSDTQRVWSSASSYVAGYLNSSHCLPEFYRCNR  257

Query  307  EIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVRSCELAVF  366
            +I P    S+ F   + F ++    E  K+ D F +G+ +   GK    RP RS    ++
Sbjct  258  KIAPFGRFSQYFAE-RPFIEAFKPEENEKVFDKFVNGIYLSLGGKPTLCRPKRSLINRLY  316

Query  367  PRFSNDFFSDSDTCCKLFQSVIETPERLVSRGYL  400
            P       SD D+  +    V + P+ L   G+L
Sbjct  317  PVLDRSAVSDVDSNVRTALFVSKIPQVLAKFGFL  350


> Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4
Length=532

 Score =   124 bits (311),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 165/348 (47%), Gaps = 49/348 (14%)

Query  4    KEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYC  63
            ++E + K +F+ C    +  NPY+ ++I  PCG C +C  NKS  +       +   ++ 
Sbjct  3    QQEFIQK-VFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKVHAQSLISRHV  61

Query  64   YFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPA  123
            YFVTLTY   ++PY   E+          D +F  + +            H RD      
Sbjct  62   YFVTLTYAQRYIPYYEYEIE-------ALDADFLAITA------------HCRD------  96

Query  124  QNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANGRYD  183
            +N + + +   ++     + ++   S + +SF          +          KAN  +D
Sbjct  97   RNPMYRTYT--YRGTKHKLRIRGLASPKVKSFS-------FSVNRDYWTSYAQKANLSFD  147

Query  184  YGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTY  243
             GK    YP+L+D   +IP L   D+ L+ KR+R+ +   G   + I  YVV EYGP T+
Sbjct  148  -GK----YPALSD---RIPYLLHDDVSLYMKRVRKYISKLGINET-IHTYVVGEYGPVTF  198

Query  244  RPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPFFYV  303
            RPH+H LLFFNS+E+ Q++       W +GR+D S SRG A  YV+SY+NS + +P    
Sbjct  199  RPHFHLLLFFNSDELAQSIVRIARSCWRFGRVDCSASRGDAEDYVSSYLNSFSSIPLHIQ  258

Query  304  GQKEIRPRSFHSKGFG-----SNKIFPKSSDVSEISKISDLFFDGVNV  346
              + IRP +  S  FG     S+    +S D  EI     L ++G N 
Sbjct  259  EIRAIRPFARFSNKFGFSFFESSIKKAQSGDFDEILNGKSLPYNGFNT  306


> Alpavirinae_Human_feces_C_043_Microviridae_AG0321_putative.VP4
Length=546

 Score =   122 bits (306),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 235/548 (43%), Gaps = 85/548 (16%)

Query  1    MIPKEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNM---A  57
            M+P +++  K L   CL  + + N Y+  +++  CG+C++C+   S  A+A ++ +   A
Sbjct  1    MLPSDQI-HKELSKTCLHGKNVYNKYTGQMMYQSCGKCEACL---SRLASARSIKVGVQA  56

Query  58   THFKYCYFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRD  117
            +  KY  FVTLTY    +P    ++     N Y         V    PR+    YY   D
Sbjct  57   SLSKYVMFVTLTYDTYHVP--KCKIYSNGDNNY---------VLVVKPRVKDYFYYETSD  105

Query  118  LSLDPAQNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIK  177
                  Q  ++ +                       S+DD+   F +  K  +      K
Sbjct  106  -----GQKRLKGL-----------------------SYDDD---FRVEFKADKDYIENFK  134

Query  178  ANGRYDYGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSE  237
                 D    K  YP L D       L  +D +LF KR+R+ +    +T  KI  Y+V E
Sbjct  135  KQANLDV---KGCYPHLKD---MYGYLSRKDCQLFMKRVRKQI--RNYTDEKIHTYIVGE  186

Query  238  YGPQTYRPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaC  297
            Y P+ +RPH+H L FFNS E++Q+    +   W +G +D+S SRG A SYVA YVNS A 
Sbjct  187  YSPKHFRPHFHILFFFNSNELSQSFGSIVRSCWKFGLVDWSQSRGDAESYVAGYVNSFAR  246

Query  298  LPFFYVGQKEIRP-----RSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKV  352
            LP+      +I P       F    F   K   + S   + + +   F +GV    NGK+
Sbjct  247  LPYHLGSSPKIAPFGRFSNHFSESCFDDAKQTLRDSFFGQKTPVFAPFLNGVTNLVNGKL  306

Query  353  INIRPVRSCELAVFPRFSNDFFSDSDTCCKLFQS---VIETPERLVSRGYLGIDTPSFGS  409
            +  RP RSC  + F R + D    S     L ++   V+E  +R  +R   G++      
Sbjct  307  LLTRPSRSCVDSCFFRKARDGRLSSHELLHLIRAVCHVVEQGKRFFARD--GLNYTFLNH  364

Query  410  DGFRLSDLVRAYSEY-YERNFTDFSFSLRF--LRGYRTRDYSDELIFREARLFDGYVFNK  466
              F    +V+A   + Y++     S   R   L  Y   D + ++   +    D      
Sbjct  365  ARF----IVKACKSFRYQKREKLLSLPSRLVTLLYYSRVDLTKDIQDYKNPDVD------  414

Query  467  DMIFGRLYRLFAKVLRCFRFWNLKQYTDSWSLKAAVKKIWSYGWEYWKKKEYRFLTTYFE  526
            + +   +YR+    +R  RFW +    D       + ++     EY++  +Y++L   F+
Sbjct  415  EAMAQSIYRVLLYTMRFVRFWKI----DKMPYHEGI-RLLDMCREYYRLLDYQYLRQRFQ  469

Query  527  YLEGCNDD  534
            +LE C +D
Sbjct  470  FLEQCEED  477


> Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4
Length=532

 Score =   116 bits (290),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 46/357 (13%)

Query  4    KEELLTKYLFTECLRPQRIVNPYSHDVIFAPCGRCKSCIMNKSNFATAYAMNMATHFKYC  63
            ++E + K +F+ C    +  NPY+ ++I  PCG C +C  NKS  +       +   ++ 
Sbjct  3    QQEFIQK-VFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKVHAQSLVSRHV  61

Query  64   YFVTLTYKDIFLPYLSVEVVRRSGNRYLFDENFETMVSTSDPRLLTPEYYHDRDLSLDPA  123
            YFVTLTY   ++PY   E+          D +F  + +    R   P Y   R  +    
Sbjct  62   YFVTLTYAQRYIPYYEYEIE-------ALDADFLAITAHCCDR--NPMY---RTYTYRGT  109

Query  124  QNEVEQVFDIGFQSIPRDVSVKSKGSFRFRSFDDEPLKFCIPMKLTELQDILIKANGRYD  183
            ++++            R ++  +  SF F    D    +         Q   +  NG+Y 
Sbjct  110  KHKLR----------IRGLASPNVKSFSFSVNRDYWTSYA--------QKANLSFNGKY-  150

Query  184  YGKKKVVYPSLADCKLQIPVLQSRDIELFFKRLRRNLDSHGFTSSKICYYVVSEYGPQTY  243
                    P+L+    +IP L   D+ L+ KR+R+ +   G   + I  Y+V EYGP ++
Sbjct  151  --------PALSG---RIPYLLHGDVSLYMKRVRKYISKLGINET-IHTYIVGEYGPSSF  198

Query  244  RPHWHCLLFFNSEEITQTLREDISKAWAYGRIDYSLSRGaaasyvasyvnsaaCLPFFYV  303
            RPH+H LLFF+S+E+ Q +    S  W +GR+D S SRG A  YV+SY+NS + +P    
Sbjct  199  RPHFHLLLFFDSDELAQNIIRIASSCWRFGRVDCSASRGDAEDYVSSYLNSFSSIPLHIQ  258

Query  304  GQKEIRPRSFHSKGFGSNKIFPKSSDVSEISKISDLFFDGVNVDSNGKVINIRPVRS  360
              + IRP +  S  FG +  F +SS     S   D   +G ++  NG    I P R+
Sbjct  259  EIRAIRPFARFSNKFGYS--FFESSIKKAQSGNFDEILNGKSLPYNGFDTTIFPWRA  313


 Score = 22.7 bits (47),  Expect = 9.2, Method: Compositional matrix adjust.
 Identities = 6/17 (35%), Positives = 12/17 (71%), Gaps = 0/17 (0%)

Query  591  LKDKVKHKEFNDMQGVL  607
            ++ ++KH+E ND  G+ 
Sbjct  505  IRKRIKHREINDAVGIF  521



Lambda      K        H        a         alpha
   0.325    0.140    0.439    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 56326467