bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Microviridae_proteins.fasta 575 sequences; 147,441 total letters Query= Contig-29_CDS_annotation_glimmer3.pl_2_3 Length=334 Score E Sequences producing significant alignments: (Bits) Value Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 442 3e-155 Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 444 1e-154 Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 435 7e-151 Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 414 1e-142 Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 414 1e-142 Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 414 1e-142 Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 387 4e-132 Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 358 6e-121 Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 338 9e-114 Gokush_JCVI_001_Microviridae_AG025_putative.VP1 313 1e-103 > Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 Length=470 Score = 442 bits (1138), Expect = 3e-155, Method: Compositional matrix adjust. Identities = 211/282 (75%), Positives = 235/282 (83%), Gaps = 3/282 (1%) Query 53 GVGFDAPTSRDGSMYLDNLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILK 112 GVG R S L A+ G V+ ATINQLR+AFQIQKLYE+DARGGTRYIEILK Sbjct 192 GVGTQGQLGRGTS---SGLIAVDDGGVSMATINQLRLAFQIQKLYERDARGGTRYIEILK 248 Query 113 SHFGVTSPDARLQRPEYLGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFI 172 SHFGVTSPDARLQRPEYLGGNRIP+ INQVVQ+S T S TP G T A+S+TTDVH +F Sbjct 249 SHFGVTSPDARLQRPEYLGGNRIPITINQVVQNSGTMSGETPQGTTTAYSLTTDVHQEFT 308 Query 173 KSFVEHGFVIGIMVARYDHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGT 232 KSFVEHGF+IG+MVARYDHTYQQGLERFWSR+DR D+Y+PVFANIGEQ ILNKEIYA G Sbjct 309 KSFVEHGFIIGVMVARYDHTYQQGLERFWSRKDRFDFYWPVFANIGEQAILNKEIYATGK 368 Query 233 VQDNEVFGYQEAWADYRYKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKT 292 D+EVFGYQEAWADYRYKPSRV+GEMRS A T LD WHLAD+Y LP LSD+WIRE+ Sbjct 369 DSDSEVFGYQEAWADYRYKPSRVSGEMRSNAKTPLDSWHLADDYDVLPTLSDSWIREESN 428 Query 293 NVDRVLAVTSAVSNQMFADLYIQCKATRPMPMYSIPGLIDHH 334 NV+RVLAVTS VSNQ+F DLY+Q + TRPMP+YSIPGLIDHH Sbjct 429 NVNRVLAVTSEVSNQLFCDLYVQNRTTRPMPVYSIPGLIDHH 470 > Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 Length=547 Score = 444 bits (1141), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 207/265 (78%), Positives = 232/265 (88%), Gaps = 0/265 (0%) Query 70 NLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEY 129 NL A G AATINQLR+AFQIQKLYE+DARGGTRYIEILKSHFGVTSPDARLQRPEY Sbjct 283 NLIAKFDGVSQAATINQLRLAFQIQKLYERDARGGTRYIEILKSHFGVTSPDARLQRPEY 342 Query 130 LGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARY 189 LGGNRIP+NINQVVQSS+T +SGTP G+TAA+S+T+D H DF KSFVEHGF+IG+MVARY Sbjct 343 LGGNRIPININQVVQSSSTDASGTPQGNTAAYSLTSDNHSDFTKSFVEHGFLIGVMVARY 402 Query 190 DHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYR 249 HTYQQGLERFWSR+DR DYYFPVFANIGEQ I NKEIYAQGTV+D+EVFGYQEAWADYR Sbjct 403 RHTYQQGLERFWSRKDRFDYYFPVFANIGEQAIKNKEIYAQGTVKDDEVFGYQEAWADYR 462 Query 250 YKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMF 309 Y+P+RV GEMRS AP SLDVWHL D+Y LP LSD+WIRED V+RVLAV+ VS Q+F Sbjct 463 YRPNRVTGEMRSSAPQSLDVWHLGDDYESLPSLSDSWIREDSKTVNRVLAVSDNVSAQLF 522 Query 310 ADLYIQCKATRPMPMYSIPGLIDHH 334 D+Y++ TRPMP+YSIPGLIDHH Sbjct 523 CDIYVRNLCTRPMPLYSIPGLIDHH 547 > Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 Length=559 Score = 435 bits (1118), Expect = 7e-151, Method: Compositional matrix adjust. Identities = 198/255 (78%), Positives = 224/255 (88%), Gaps = 0/255 (0%) Query 80 TAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPVNI 139 T+ATINQLR+AFQIQKLYEKDARGGTRY EILK+HFGVTSPD+RLQRPEYLGGNR+P+NI Sbjct 305 TSATINQLRLAFQIQKLYEKDARGGTRYTEILKTHFGVTSPDSRLQRPEYLGGNRVPINI 364 Query 140 NQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARYDHTYQQGLER 199 NQVVQ+SAT TPLG+ A +SVT+D H DF +SF EHGFVIG+MVARYDHTYQQG+ER Sbjct 365 NQVVQNSATVEGETPLGNVAGYSVTSDTHSDFRQSFTEHGFVIGVMVARYDHTYQQGIER 424 Query 200 FWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYRYKPSRVAGEM 259 FWSR+ R DYY+PV ANIGEQ +LNKEIYAQGT +D+EVFGYQEAW DYRYKP+RV GEM Sbjct 425 FWSRKTRFDYYWPVLANIGEQAVLNKEIYAQGTAEDDEVFGYQEAWGDYRYKPNRVTGEM 484 Query 260 RSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMFADLYIQCKAT 319 RS+ SLDVWHL D+YT+LP LS WI EDKTNVDRVLAVTS +NQ+FADLYI + T Sbjct 485 RSQYAQSLDVWHLGDDYTKLPSLSSEWIVEDKTNVDRVLAVTSTNANQLFADLYINNQTT 544 Query 320 RPMPMYSIPGLIDHH 334 RPMPMYSIPGL+DHH Sbjct 545 RPMPMYSIPGLVDHH 559 > Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 Length=562 Score = 414 bits (1063), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 222/265 (84%), Gaps = 0/265 (0%) Query 70 NLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEY 129 NLWA+ GN AATINQLR+AFQIQK YE+ ARGG+RY E+++S FGVTSPDARLQRPEY Sbjct 298 NLWAVADGNAAAATINQLRLAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEY 357 Query 130 LGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARY 189 LGGNR+P+N+NQ+VQ S TQS TP G S+TTD H DF KSF EHG +IG+MVARY Sbjct 358 LGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARY 417 Query 190 DHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYR 249 DHTYQQGL R WSR+D+ D+Y+PVFANIGEQ I NKEI+AQG +DNEVFGYQEAWA+YR Sbjct 418 DHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDNEVFGYQEAWAEYR 477 Query 250 YKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMF 309 YKP+ V GEMRS SLDVWHLAD+Y+ LP LSD+WIREDK N+DRVLAVTSAVSNQ F Sbjct 478 YKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFF 537 Query 310 ADLYIQCKATRPMPMYSIPGLIDHH 334 AD+Y++ TRPMPMYS+PGLIDHH Sbjct 538 ADIYVKNYCTRPMPMYSVPGLIDHH 562 > Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 Length=562 Score = 414 bits (1063), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 222/265 (84%), Gaps = 0/265 (0%) Query 70 NLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEY 129 NLWA+ GN AATINQLR+AFQIQK YE+ ARGG+RY E+++S FGVTSPDARLQRPEY Sbjct 298 NLWAVADGNAAAATINQLRLAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEY 357 Query 130 LGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARY 189 LGGNR+P+N+NQ+VQ S TQS TP G S+TTD H DF KSF EHG +IG+MVARY Sbjct 358 LGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARY 417 Query 190 DHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYR 249 DHTYQQGL R WSR+D+ D+Y+PVFANIGEQ I NKEI+AQG +DNEVFGYQEAWA+YR Sbjct 418 DHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDNEVFGYQEAWAEYR 477 Query 250 YKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMF 309 YKP+ V GEMRS SLDVWHLAD+Y+ LP LSD+WIREDK N+DRVLAVTSAVSNQ F Sbjct 478 YKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFF 537 Query 310 ADLYIQCKATRPMPMYSIPGLIDHH 334 AD+Y++ TRPMPMYS+PGLIDHH Sbjct 538 ADIYVKNYCTRPMPMYSVPGLIDHH 562 > Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 Length=562 Score = 414 bits (1063), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 222/265 (84%), Gaps = 0/265 (0%) Query 70 NLWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEY 129 NLWA+ GN AATINQLR+AFQIQK YE+ ARGG+RY E+++S FGVTSPDARLQRPEY Sbjct 298 NLWAVADGNAAAATINQLRLAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEY 357 Query 130 LGGNRIPVNINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARY 189 LGGNR+P+N+NQ+VQ S TQS TP G S+TTD H DF KSF EHG +IG+MVARY Sbjct 358 LGGNRVPINVNQIVQQSGTQSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARY 417 Query 190 DHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYR 249 DHTYQQGL R WSR+D+ D+Y+PVFANIGEQ I NKEI+AQG +DNEVFGYQEAWA+YR Sbjct 418 DHTYQQGLNRLWSRKDKFDFYWPVFANIGEQAIKNKEIFAQGNDKDNEVFGYQEAWAEYR 477 Query 250 YKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMF 309 YKP+ V GEMRS SLDVWHLAD+Y+ LP LSD+WIREDK N+DRVLAVTSAVSNQ F Sbjct 478 YKPNMVTGEMRSAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFF 537 Query 310 ADLYIQCKATRPMPMYSIPGLIDHH 334 AD+Y++ TRPMPMYS+PGLIDHH Sbjct 538 ADIYVKNYCTRPMPMYSVPGLIDHH 562 > Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 Length=587 Score = 387 bits (995), Expect = 4e-132, Method: Compositional matrix adjust. Identities = 178/266 (67%), Positives = 218/266 (82%), Gaps = 2/266 (1%) Query 71 LWAIQSGNVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYL 130 L A+ G V+ ATINQLR+AFQIQK YE+ ARGG+RY E+++S FGVTSPDARLQRPEYL Sbjct 322 LVALNDGAVSVATINQLRLAFQIQKFYERQARGGSRYTEVIRSFFGVTSPDARLQRPEYL 381 Query 131 GGNRIPVNINQVVQ--SSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVAR 188 GGNR+P+NINQV+Q + ++SS TP G S TTD + DF KSF EHGF+IG+MVAR Sbjct 382 GGNRVPININQVIQQSGTGSESSSTPQGTVVGMSQTTDTNSDFTKSFTEHGFIIGVMVAR 441 Query 189 YDHTYQQGLERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADY 248 YDHTYQQGL+R WSR+D+ D+Y+PVFANIGEQ I NKE+YAQGT +D+EVFGYQEAWA+Y Sbjct 442 YDHTYQQGLDRLWSRKDKFDFYWPVFANIGEQAIKNKELYAQGTAEDDEVFGYQEAWAEY 501 Query 249 RYKPSRVAGEMRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQM 308 RYKP+RV GEMRS SLD+WHLAD+Y++LP LS WI+ED + V+RVLA + ++ Q Sbjct 502 RYKPNRVTGEMRSSYAKSLDIWHLADDYSKLPSLSAEWIQEDSSTVNRVLAASDNLAAQF 561 Query 309 FADLYIQCKATRPMPMYSIPGLIDHH 334 FAD+Y++ TRPMPMYSIPGLIDHH Sbjct 562 FADIYVKNLCTRPMPMYSIPGLIDHH 587 > Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 Length=578 Score = 358 bits (920), Expect = 6e-121, Method: Compositional matrix adjust. Identities = 168/259 (65%), Positives = 201/259 (78%), Gaps = 2/259 (1%) Query 78 NVTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPV 137 + TAATIN+LR+AFQ+QKLYE+DARGGTRYIEI+KSHFGVTSPDARLQRPEYLGG RIP+ Sbjct 320 HATAATINELRLAFQLQKLYERDARGGTRYIEIIKSHFGVTSPDARLQRPEYLGGERIPI 379 Query 138 NINQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARYDHTYQQGL 197 NI+QV+Q+S T TP G+T A+S+T F SFVEHG+V+G+ R +HTYQQGL Sbjct 380 NIDQVIQTSGTAEGTTPQGNTGAYSLTGSQGSYFKHSFVEHGYVLGLACVRTEHTYQQGL 439 Query 198 ERFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDN-EVFGYQEAWADYRYKPSRVA 256 E+ W+R++R D+Y+P ANIGEQ ILNKEIY Q + N E FGYQEAWA+YRYKPSRV+ Sbjct 440 EKIWNRKNRFDFYWPALANIGEQAILNKEIYLQASKATNEEAFGYQEAWAEYRYKPSRVS 499 Query 257 GEMRSKAPT-SLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMFADLYIQ 315 RS T SLD WH AD Y +LPKLS WI+E NVDR LAV S + +Q AD + + Sbjct 500 SAFRSNIETGSLDAWHYADYYEELPKLSAEWIQETYKNVDRTLAVQSTLEDQYIADFWFK 559 Query 316 CKATRPMPMYSIPGLIDHH 334 CK TRPMP+YSIPGLIDHH Sbjct 560 CKCTRPMPIYSIPGLIDHH 578 > Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 Length=530 Score = 338 bits (868), Expect = 9e-114, Method: Compositional matrix adjust. Identities = 161/256 (63%), Positives = 192/256 (75%), Gaps = 3/256 (1%) Query 79 VTAATINQLRMAFQIQKLYEKDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPVN 138 VT+ATINQLR AFQIQKL EKDARGGTRY E+L+ HFGV SPD+R+Q PEYLGG R+P+N Sbjct 278 VTSATINQLRQAFQIQKLLEKDARGGTRYREVLREHFGVISPDSRMQIPEYLGGYRLPIN 337 Query 139 INQVVQSSATQSSGTPLGDTAAFSVTTDVHGDFIKSFVEHGFVIGIMVARYDHTYQQGLE 198 ++QV+Q+S+T S+ +PLG+TAA SVTT F KSF EHGF++G+ V R D TYQQG+E Sbjct 338 VSQVIQTSSTDST-SPLGNTAALSVTTMNKPMFTKSFTEHGFIMGLAVVRTDQTYQQGIE 396 Query 199 RFWSRRDRLDYYFPVFANIGEQPILNKEIYAQGTVQDNEVFGYQEAWADYRYKPSRVAGE 258 R WSR+ R DYY+PV ANIGEQ ILNKEIYAQG+ +D E FGYQEAWADYRYKPS+V Sbjct 397 RMWSRKGRYDYYWPVLANIGEQAILNKEIYAQGSAKDEEAFGYQEAWADYRYKPSKVTAL 456 Query 259 MRSKAPTSLDVWHLADEYTQLPKLSDAWIREDKTNVDRVLAVTSAVSNQMFADLYIQCKA 318 RS A SLD WH A +Y +LP LS AW+ + + R LA + AD Y K Sbjct 457 FRSNAQQSLDAWHYAQDYNELPTLSTAWMEQSNAEMKRTLARSD--QPDFIADFYFMNKT 514 Query 319 TRPMPMYSIPGLIDHH 334 TR MP+YSIPGLIDHH Sbjct 515 TRCMPVYSIPGLIDHH 530 > Gokush_JCVI_001_Microviridae_AG025_putative.VP1 Length=560 Score = 313 bits (803), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 161/295 (55%), Positives = 204/295 (69%), Gaps = 13/295 (4%) Query 42 LGGTDVESVATGVGFDAPTSRDGSMYLDNLWAIQSGNVTAATINQLRMAFQIQKLYEKDA 101 +GGT V+ V +G TS D +Y D A TAATINQLR +FQIQ+L E+DA Sbjct 275 VGGT-VQGVDKALG--VATSGDTGIYADLSAA------TAATINQLRESFQIQRLLERDA 325 Query 102 RGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPVNINQVVQSSATQS--SGTPLGDTA 159 RGGTRY EI++SHFGV SPDARLQRPEYLGG PVNI+ + Q+SAT S + TPLG+ A Sbjct 326 RGGTRYTEIIRSHFGVISPDARLQRPEYLGGGSTPVNISPIAQTSATASGATATPLGNLA 385 Query 160 AFSVTTDVHGDFIKSFVEHGFVIGIMVARYDHTYQQGLERFWSRRDRLDYYFPVFANIGE 219 A + F +SFVEHG VIG++ R D TYQQG+ + WSRR R D+YFPVFA++GE Sbjct 386 AMGTALAMGHGFTQSFVEHGHVIGLVAVRADLTYQQGMRKMWSRRTRYDFYFPVFAHLGE 445 Query 220 QPILNKEIYAQGTVQDNEVFGYQEAWADYRYKPSRVAGEMRSKAPTSLDVWHLADEYTQL 279 Q +LNKEIY GT D++VFGYQE WA+YRY PS++ RS A +LD WHLA ++ L Sbjct 446 QAVLNKEIYTTGTSTDDDVFGYQERWAEYRYHPSQITSLFRSTAAGTLDAWHLAQNFSSL 505 Query 280 PKLSDAWIREDKTNVDRVLAVTSAVSNQMFA-DLYIQCKATRPMPMYSIPGLIDH 333 P L+ ++I +D VDRV+A+ + + Q F D + KA RPMP+YS+PGLIDH Sbjct 506 PTLNTSFI-QDNPPVDRVVAIGAEANGQQFIFDSFFDIKAARPMPLYSVPGLIDH 559 Lambda K H a alpha 0.318 0.133 0.404 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 28557990