bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-27_CDS_annotation_glimmer3.pl_2_6
Length=66
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.p... 129 3e-39
Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.... 97.1 1e-27
Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.p... 22.7 0.30
Alpavirinae_Human_feces_B_021_Microviridae_AG0372_putative.VP4 20.8 1.6
Alpavirinae_Human_gut_33_005_Microviridae_AG0183_putative.pepti... 20.4 1.8
Gokush_gi|9629145|ref|NP_044314.1|_VP2_[Chlamydia_phage_1] 20.0 2.7
Gokush_gi|19424731|ref|NP_598335.1|_hypothetical_protein_Sp-4p1... 19.6 4.0
Alpavirinae_Human_feces_D_008_Microviridae_AG099_hypothetical.p... 18.9 7.5
> Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.protein.BACEGG.02723
Length=354
Score = 129 bits (323), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 60/66 (91%), Positives = 62/66 (94%), Gaps = 0/66 (0%)
Query 1 MDRWSQDPVKARWDRGINNAGKFIDGLSNIVGAVTKFGSFRREGRSVIEQFDDNQGYSST 60
MDRW QDPVKARWDRGINNAGKFIDGLSN VG++ KFGSF REGRSVIEQFDDNQGYSST
Sbjct 289 MDRWLQDPVKARWDRGINNAGKFIDGLSNAVGSLLKFGSFLREGRSVIEQFDDNQGYSST 348
Query 61 RQRYRR 66
RQRYRR
Sbjct 349 RQRYRR 354
> Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.protein.BACPLE
Length=365
Score = 97.1 bits (240), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 50/74 (68%), Positives = 55/74 (74%), Gaps = 11/74 (15%)
Query 1 MDRWSQDPVKARWDRGINNAGKFIDGLSNIVGAVTKFG-----------SFRREGRSVIE 49
MDRWSQDPVKARWDRGINNAGKFIDGLSNIVG+VTKFG S R+ R ++
Sbjct 289 MDRWSQDPVKARWDRGINNAGKFIDGLSNIVGSVTKFGFLKNANNSLKESKRQFDRGTVD 348
Query 50 QFDDNQGYSSTRQR 63
FDDN+GYS TRQ
Sbjct 349 IFDDNKGYSWTRQH 362
> Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.protein.BACEGG.02723
Length=427
Score = 22.7 bits (47), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (44%), Gaps = 9/71 (13%)
Query 3 RWSQDPVKARWDRGINNAGKFIDGLSNIVGAVTKFGSFRRE-GRSV------IEQFDDNQ 55
RW D W IN+A + G S+++ A + + R E GR E+FD +
Sbjct 359 RW--DNEMQAWREAINSANALLRGSSDVMDAYNTYENGRYERGRPYSSDYEEYEEFDKAR 416
Query 56 GYSSTRQRYRR 66
G + Y+R
Sbjct 417 GTRRKTRNYKR 427
> Alpavirinae_Human_feces_B_021_Microviridae_AG0372_putative.VP4
Length=332
Score = 20.8 bits (42), Expect = 1.6, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 2/29 (7%)
Query 9 VKARWDRGINNAGKFIDGLSNIVGAVTKF 37
++ +W+ GI G F++ + +TK+
Sbjct 144 IREKWNYGITYTGNFVN--EKTINYITKY 170
> Alpavirinae_Human_gut_33_005_Microviridae_AG0183_putative.peptidase.M15A
Length=131
Score = 20.4 bits (41), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/36 (31%), Positives = 18/36 (50%), Gaps = 1/36 (3%)
Query 1 MDRWSQDPVKARWDRGINNAGKF-IDGLSNIVGAVT 35
+ RW DPV+ + + I F L+ +VG V+
Sbjct 36 LCRWILDPVREMYGKPIVVTSGFRTPFLNRLVGGVS 71
> Gokush_gi|9629145|ref|NP_044314.1|_VP2_[Chlamydia_phage_1]
Length=263
Score = 20.0 bits (40), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/44 (32%), Positives = 20/44 (45%), Gaps = 9/44 (20%)
Query 19 NAGKFIDGLSNIVGAVTKFGSFRREGRSVIEQFDDNQGYSSTRQ 62
N G+FI N VG+V G ++ F+ Q SS +Q
Sbjct 6 NVGRFIGNSVNSVGSVIGDG---------LKGFNSTQSISSAKQ 40
> Gokush_gi|19424731|ref|NP_598335.1|_hypothetical_protein_Sp-4p1_[Spiroplasma_phage_4]
Length=320
Score = 19.6 bits (39), Expect = 4.0, Method: Composition-based stats.
Identities = 5/21 (24%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 3 RWSQDPVKARWDRGINNAGKF 23
+W+ + WD+G + G+
Sbjct 161 QWTSKTISRFWDKGFHTIGEL 181
> Alpavirinae_Human_feces_D_008_Microviridae_AG099_hypothetical.protein.BACEGG.02723
Length=418
Score = 18.9 bits (37), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/51 (22%), Positives = 22/51 (43%), Gaps = 14/51 (27%)
Query 4 WSQDPVKARWDRGINNAGKFIDGLSNIVGAV-------TKFGSFRREGRSV 47
W +P+ N G+ + G+ VG+V +K S ++ G++
Sbjct 363 WKNNPI-------YYNIGELLKGILGSVGSVAGPLYLGSKVSSLKKAGKAA 406
Lambda K H a alpha
0.320 0.136 0.420 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3658814