bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-17_CDS_annotation_glimmer3.pl_2_2

Length=84
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1       21.6    1.5
  Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1       20.0    4.8
  Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical....  19.2    6.2  
  Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1      19.6    7.4
  Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1      19.2    8.9


> Alpavirinae_Human_gut_22_017_Microviridae_AG0397_putative.VP1
Length=607

 Score = 21.6 bits (44),  Expect = 1.5, Method: Composition-based stats.
 Identities = 10/24 (42%), Positives = 13/24 (54%), Gaps = 0/24 (0%)

Query  3    EYVQYYSEISTKPTADYRMFKRYH  26
            E +Q + EIS    +DYR   R H
Sbjct  352  EALQRWKEISQSGDSDYREQIRKH  375


> Alpavirinae_Human_gut_33_017_Microviridae_AG0154_putative.VP1
Length=614

 Score = 20.0 bits (40),  Expect = 4.8, Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 0/18 (0%)

Query  3    EYVQYYSEISTKPTADYR  20
            E +Q + EIS    +DYR
Sbjct  361  EALQRWKEISQSGDSDYR  378


> Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.protein
Length=80

 Score = 19.2 bits (38),  Expect = 6.2, Method: Compositional matrix adjust.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (2%)

Query  12  STKPTADYRMFKRYHAFKMKNEQEITGWKIDMNGCVLKEYLIRKKGGQIRLRLTKD  67
           + K    ++ FKR+    +   + + G++I     + K Y I+K   ++ + +T D
Sbjct  3   NNKRFTTFKTFKRWLWHNLHTGETLEGFQI-WEDTIFKSYNIKKTERRLLVEITYD  57


> Alpavirinae_Human_feces_B_023_Microviridae_AG0145_putative.VP1
Length=668

 Score = 19.6 bits (39),  Expect = 7.4, Method: Compositional matrix adjust.
 Identities = 6/18 (33%), Positives = 13/18 (72%), Gaps = 0/18 (0%)

Query  49   KEYLIRKKGGQIRLRLTK  66
            + +   KKGGQ+ +++T+
Sbjct  490  RGFASNKKGGQLHIKVTE  507


> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651

 Score = 19.2 bits (38),  Expect = 8.9, Method: Compositional matrix adjust.
 Identities = 6/13 (46%), Positives = 12/13 (92%), Gaps = 0/13 (0%)

Query  54   RKKGGQIRLRLTK  66
            ++KGG+I++R T+
Sbjct  474  KQKGGKIKVRATE  486



Lambda      K        H        a         alpha
   0.321    0.136    0.420    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3625946